Select Pa12g0961 Pa12g0961 Pa12g0961.1Pa12g0961 | Pa12g0961.1 | LOC104595938 | 337451.A0A3S3N8Q7 | DUF4219@131567|A-1* | DUF4219@2759|M-4! | Retrotran_gag_2@131567|sA-26 | Retrotrans_gag@1437183|B-2! | zf-CCHC@131567|Em-12 | zf-CCHC@2759|Gu-13! | S | ec:2.3.1.199 | ec:2.3.2.27 | ec:2.4.1.1 | ec...
Show annotation evidence
eggNOG Preferred name: LOC104595938 | Seed ortholog: 337451.A0A3S3N8Q7 | COG: S | eggNOG OG: DUF4219@131567|A-1*, DUF4219@2759|M-4!, Retrotran_gag_2@131567|sA-26, Retrotrans_gag@1437183|B-2!, zf-CCHC@131567|Em-12, zf-CCHC@2759|Gu-13!
GO GO:0000151 ubiquitin ligase complex; GO:0000175 3'-5'-RNA exonuclease activity; GO:0000243 commitment complex; GO:0000245 spliceosomal complex assembly; GO:0000278 mitotic cell cycle; GO:0000348 mRNA branch site recognition; GO:0000373 Group II intron splicing; GO:0000380 alternative mRNA splicing, via spliceosome; GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0000389 mRNA 3'-splice site...
KEGG EC: ec:2.3.1.199, ec:2.3.2.27, ec:2.4.1.1, ec:2.4.1.99, ec:2.7.7.23, ec:2.7.7.52, ec:2.7.7.7, ec:2.7.7.83, ec:3.1.4.1, ec:3.4.19.12, ec:3.5.4.12, ec:3.5.4.19, ec:3.6.1.31, ec:4.2.99.18, ec:5.6.2.1, ec:5.6.2.3, ec:5.6.2.4, ec:5.6.2.5, ec:5.6.2.7 | KO: K03260 | Pathway: 00062, 00240, 00340, 00500, 00520, 01100, 01110, 01230, 01232, 01250, 02010, 03008, 03015, 03018, 03030, 03040, 03410, 03420, 03430, 03440, 03450,... eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1013 Pa12g1013 Pa12g1013.1Pa12g1013 | Pa12g1013.1 | rpa49 | 337451.A0A3S3P9Z8 | RNA_pol_I_A49@2759|A-1 | S | K03005 | 03020 | 00001 | 01611 | 03021 | RNA_pol_I_A49_67_422 | GO:0001179 | GO:0001188 | GO:0001650 | GO:0003677 | GO:0003899 | GO:0005515 | GO:0005575 | GO:0005634 | GO...
Show annotation evidence
eggNOG Preferred name: rpa49 | Seed ortholog: 337451.A0A3S3P9Z8 | COG: S | eggNOG OG: RNA_pol_I_A49@2759|A-1
GO GO:0001179 RNA polymerase I general transcription initiation factor binding; GO:0001188 RNA polymerase I preinitiation complex assembly; GO:0001650 fibrillar center; GO:0003677 DNA binding; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005736 RNA polymerase I complex; GO:0006360...
KEGG KO: K03005 | Pathway: 03020 | BRITE: 00001, 01611, 03021 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1014 Pa12g1014 Pa12g1014.1Pa12g1014 | Pa12g1014.1 | Pa12g1014.2 | rpa49 | 337451.A0A443Q188 | RNA_pol_I_A49@2759|A-1 | S | K03005 | 03020 | 00001 | 01611 | 03021 | RNA_pol_I_A49_12_309 | GO:0001179 | GO:0001188 | GO:0001650 | GO:0003677 | GO:0003899 | GO:0005515 | GO:0005575 | GO...
Show annotation evidence
eggNOG Preferred name: rpa49 | Seed ortholog: 337451.A0A443Q188 | COG: S | eggNOG OG: RNA_pol_I_A49@2759|A-1
GO GO:0001179 RNA polymerase I general transcription initiation factor binding; GO:0001188 RNA polymerase I preinitiation complex assembly; GO:0001650 fibrillar center; GO:0003677 DNA binding; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005736 RNA polymerase I complex; GO:0006360...
KEGG KO: K03005 | Pathway: 03020 | BRITE: 00001, 01611, 03021 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1028 Pa12g1028 Pa12g1028.1Pa12g1028 | Pa12g1028.1 | Pa12g1028.2 | PanPGP22 | 337451.A0A443Q1U1 | ABC_membrane@131567|aH-23 | ABC_membrane@2759|CyF-36 | ABC_membrane@3398|rpF-52 | ABC_membrane@35493|WZq-46 | ABC_tran|0DFRDX@131567 | ABC_tran|0DFRDX@3398 | S | ec:7.6.2.2 | K05658 |...
Show annotation evidence
eggNOG Preferred name: PanPGP22 | Seed ortholog: 337451.A0A443Q1U1 | COG: S | eggNOG OG: ABC_membrane@131567|aH-23, ABC_membrane@2759|CyF-36, ABC_membrane@3398|rpF-52, ABC_membrane@35493|WZq-46, ABC_tran|0DFRDX@131567, ABC_tran|0DFRDX@3398
GO GO:0000086 G2/M transition of mitotic cell cycle; GO:0000139 Golgi membrane; GO:0001654 eye development; GO:0001666 response to hypoxia; GO:0001894 tissue homeostasis; GO:0005515 protein binding; GO:0005524 ATP binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005768 endosome; GO:0005829 cytosol; GO:0005886 plasma membrane; GO:0005919 pleated septate junction; GO:0005925 focal...
KEGG EC: ec:7.6.2.2 | KO: K05658 | Pathway: 02010 | BRITE: 00001, 01000, 02000, 04090, 04147 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1035 Pa12g1035 Pa12g1035.1…GO:0009751 | GO:0009753 | GO:0010167 | GO:0010182 | GO:0032204 | GO:0042542 | DNA-binding transcription factor a ctivity | protein binding | calmodulin binding | nucleus | cytoplasm | regulation of DNA-templated transcription | circadian rhythm | response to cold | embryo sac development | pollen dev…
Show annotation evidence
eggNOG Preferred name: BT1 | Seed ortholog: 337451.A0A3S3RAM6 | COG: S | eggNOG OG: BTB@131567|AAN-18, BTB@2759|Cex-25, BTB@3193|cbw-51, zf-TAZ@131567|A-1*, zf-TAZ@2759|B-2, zf-TAZ@3193|E-3
GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009409 response to cold; GO:0009553 embryo sac development; GO:0009555 pollen development; GO:0009611 response to wounding; GO:0009651 response to salt stress; GO:0009733...
KEGG KO: K10471, K10472, K10477, K10478, K10480, K10481, K10523, K11267, K20129 | Pathway: 04341 | BRITE: 00001, 03036, 04121, 04131 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1044 Pa12g1044 Pa12g1044.1…tor binding | protein binding | nucleus | ubiquitin-dependent protein catabolic process | transcription factor b inding | proteasome regulatory particle, base subcomplex | plastid | ATP hydrolysis activity | TBP-class protein binding | protein domain specific binding | thyrotropin-releasing hormone r…
Show annotation evidence
eggNOG Preferred name: RPT6A | Seed ortholog: 2094558.A0A314ZSI8 | COG: S | eggNOG OG: AAA@131567|Afu-19, AAA@2759|NSS-33, AAA_lid_3@131567|DL-10, AAA_lid_3@2759|Xo-16, AAA_lid_3@3398|PoJ-42, Prot_ATP_ID_OB@131567|A-1, Prot_ATP_ID_OB@2759|Ae-8
GO GO:0000502 proteasome complex; GO:0003712 transcription coregulator activity; GO:0005102 signaling receptor binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0008134 transcription factor binding; GO:0008540 proteasome regulatory particle, base subcomplex; GO:0009536 plastid; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding;...
KEGG KO: K03066 | Pathway: 03050 | BRITE: 00001, 03051 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1046 Pa12g1046 Pa12g1046.1Pa12g1046 | Pa12g1046.1 | LOC107898647 | 337451.A0A3S3P5T6 | RRM_1@131567|BIg-25 | RRM_1@3398|bdG-41 | COG0724 | K14398 | 03015 | 03250 | 00001 | 03019 | RRM_1_237_306 | GO:0000381 | GO:0003723 | GO:0003729 | GO:0005515 | GO:0005634 | GO:0005654 | GO...
Show annotation evidence
eggNOG Preferred name: LOC107898647 | Seed ortholog: 337451.A0A3S3P5T6 | COG: COG0724 | eggNOG OG: RRM_1@131567|BIg-25, RRM_1@3398|bdG-41
GO GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005726 perichromatin fibrils; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005847 mRNA cleavage and polyadenylation specificity factor complex; GO:0005849 mRNA cleavage factor complex; GO:0006397 mRNA processing; GO...
KEGG KO: K14398 | Pathway: 03015, 03250 | BRITE: 00001, 03019 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1055 Pa12g1055 Pa12g1055.1…GO:0043565 | GO:0045454 | GO:0048364 | GO:0048366 | GO:0051457 | GO:0090610 | DNA-binding transcription factor a ctivity | protein binding | nucleus | asymmetric cell division | gravitropism | radial pattern formation | sequence-specific DNA binding | cell redox homeostasis | root development | leaf …
Show annotation evidence
eggNOG Preferred name: LOC104612932 | Seed ortholog: 56857.A0A200R351 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|NC-17, GRAS@3398|WW-19
GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008356 asymmetric cell division; GO:0009630 gravitropism; GO:0009956 radial pattern formation; GO:0043565 sequence-specific DNA binding; GO:0045454 cell redox homeostasis; GO:0048364 root development; GO:0048366 leaf development; GO:0051457 maintenance of protein location in nucleus; GO:0090610 bundle sheath...
KEGG KO: K27742 | BRITE: 00001, 03000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1056 Pa12g1056 Pa12g1056.1…GO:0043565 | GO:0045454 | GO:0048364 | GO:0048366 | GO:0051457 | GO:0090610 | DNA-binding transcription factor a ctivity | protein binding | nucleus | asymmetric cell division | gravitropism | radial pattern formation | sequence-specific DNA binding | cell redox homeostasis | root development | leaf …
Show annotation evidence
eggNOG Preferred name: SCR | Seed ortholog: 214687.M0RTT7 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|NC-17, GRAS@3398|WW-19, GRAS@4640|Bps-29
GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008356 asymmetric cell division; GO:0009630 gravitropism; GO:0009956 radial pattern formation; GO:0043565 sequence-specific DNA binding; GO:0045454 cell redox homeostasis; GO:0048364 root development; GO:0048366 leaf development; GO:0051457 maintenance of protein location in nucleus; GO:0090610 bundle sheath...
KEGG KO: K27742 | BRITE: 00001, 03000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1130 Pa12g1130 Pa12g1130.1…355 | GO:0042802 | GO:0043565 | transcription cis-regulatory region binding | DNA-binding transcription factor a ctivity | protein binding | nucleus | regulation of DNA-templated transcription | identical protein binding | sequence-specific DNA binding
Show annotation evidence
eggNOG Preferred name: GT-1 | Seed ortholog: 337451.A0A3S3R8H3 | COG: S | eggNOG OG: Myb_DNA-bind_4@131221|Cu-10, Myb_DNA-bind_4@131567|c-5, Myb_DNA-bind_4@2759|As-8
GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding eggNOG GO
eggNOG-inferred Record JBrowse Workspace Select Pa12g1171 Pa12g1171 Pa12g1171.1…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor a ctivity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…
Show annotation evidence
eggNOG Preferred name: LOC104593297 | Seed ortholog: 337451.A0A3S3PXT3 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|EvR-34, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|Ez-9!
GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1172 Pa12g1172 Pa12g1172.1…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor a ctivity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…
Show annotation evidence
eggNOG Preferred name: LOC104593297 | Seed ortholog: 337451.A0A443N8U5 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|EvR-34, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|Ez-9!
GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1173 Pa12g1173 Pa12g1173.1…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor a ctivity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…
Show annotation evidence
eggNOG Preferred name: LOC104593297 | Seed ortholog: 337451.A0A443N4S7 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|EvR-34, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|Ez-9!
GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1181 Pa12g1181 Pa12g1181.1Pa12g1181 | Pa12g1181.1 | LIN28A | 4432.A0A1U7Z0X3 | zf-CCHC@131567|Em-12 | zf-CCHC@2759|AOx-21 | S | ec:2.3.2.27 | K13187 | K18754 | 00001 | 03019 | 03041 | zf-CCHC_178_192 | GO:0000151 | GO:0000278 | GO:0000381 | GO:0000398 | GO:0000932 | GO:0001708 | GO...
Show annotation evidence
eggNOG Preferred name: LIN28A | Seed ortholog: 4432.A0A1U7Z0X3 | COG: S | eggNOG OG: zf-CCHC@131567|Em-12, zf-CCHC@2759|AOx-21
GO GO:0000151 ubiquitin ligase complex; GO:0000278 mitotic cell cycle; GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0000398 mRNA splicing, via spliceosome; GO:0000932 P-body; GO:0001708 cell fate specification; GO:0002119 nematode larval development; GO:0002151 G-quadruplex RNA binding; GO:0002190 cap-independent translational initiation; GO:0002192 IRES-dependent translational initiation...
KEGG EC: ec:2.3.2.27 | KO: K13187, K18754 | BRITE: 00001, 03019, 03041 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1223 Pa12g1223 Pa12g1223.1…GO:0042803 | GO:0043565 | GO:0045892 | GO:0046982 | GO:0048481 | GO:1903288 | DNA-binding transcription factor a ctivity | protein binding | nucleus | negative regulation of cell population proliferation | response to abscisic acid | fruit ripening | fruit ripening, climacteric | positive regulation …
Show annotation evidence
eggNOG Preferred name: ARF2 | Seed ortholog: 337451.A0A443N3M7 | COG: S | eggNOG OG: AUX_IAA@131567|A-1*, AUX_IAA@2759|AW-7, AUX_IAA@3193|qd-19, AUX_IAA@3398|Auy-26, Auxin_resp@131567|A-1*, Auxin_resp@2759|N-4, Auxin_resp@3398|CF-11
GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008285 negative regulation of cell population proliferation; GO:0009737 response to abscisic acid; GO:0009835 fruit ripening; GO:0009836 fruit ripening, climacteric; GO:0009911 positive regulation of flower development; GO:0010047 fruit dehiscence; GO:0010150 leaf senescence; GO:0010227 floral organ abscission...
KEGG KO: K14486 | Pathway: 04075 | BRITE: 00001 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1240 Pa12g1240 Pa12g1240.1…ay | regulation of miRNA-mediated gene silencing | RNA polymerase II-specific DNA-binding transcription factor b inding | ubiquitin protein ligase activity | NEDD8 ligase activity | cellular response to chemical stress | protein K63-linked ubiquitination | protein K48-linked ubiquitination | protein …
Show annotation evidence
eggNOG Preferred name: RBX1 | Seed ortholog: 337451.A0A443Q1K3 | COG: S | eggNOG OG: zf-rbx1@131567|Gg-12, zf-rbx1@2759|IE-13!
GO GO:0000045 autophagosome assembly; GO:0000082 G1/S transition of mitotic cell cycle; GO:0000086 G2/M transition of mitotic cell cycle; GO:0000109 nucleotide-excision repair complex; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000151 ubiquitin ligase complex; GO:0000165 MAPK cascade; GO:0000209 protein polyubiquitination; GO:0000409 regulation of transcription by galactose; GO:0000423...
KEGG EC: ec:2.3.2.32 | KO: K03358, K03868, K10611 | Pathway: 03420, 04066, 04110, 04111, 04114, 04120, 04141, 04310, 04341, 04350, 04710, 05131, 05170, 05200, 05211 | BRITE: 00001, 01000, 03036, 03400, 04121 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1266 Pa12g1266 Pa12g1266.1…O:0005515 | GO:0005634 | GO:0006355 | GO:0008283 | GO:1905392 | DNA binding | DNA-binding transcription factor a ctivity | protein binding | nucleus | regulation of DNA-templated transcription | cell population proliferation | plant organ morphogenesis
Show annotation evidence
eggNOG Preferred name: BBM2 | Seed ortholog: 337451.A0A3S3RAD3 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Apr-24, AP2@33090|Xs-18, AP2@58023|EFp-30
GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0008283 cell population proliferation; GO:1905392 plant organ morphogenesis
KEGG KO: K09285 | BRITE: 00001, 03000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1324 Pa12g1324 Pa12g1324.1…O:0010100 | GO:0010228 | GO:0048573 | GO:0090351 | GO:1902448 | DNA binding | DNA-binding transcription factor a ctivity | transcription coregulator activity | protein binding | nucleus | regulation of DNA-templated transcription | response to light stimulus | negative regulation of photomorphogenesi…
Show annotation evidence
eggNOG Preferred name: BBX24 | Seed ortholog: 337451.A0A443Q1A9 | COG: S | eggNOG OG: zf-B_box@2759|B-2!, zf-B_box@33090|l-7, zf-B_box@35493|BH-10
GO GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003712 transcription coregulator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009416 response to light stimulus; GO:0010100 negative regulation of photomorphogenesis; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0048573 photoperiodism,...
KEGG KO: K12135 | Pathway: 04712 | BRITE: 00001 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1326 Pa12g1326 Pa12g1326.1…23|C-2 | S | GO:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | GO:0009739 | DNA-binding transcription factor a ctivity | protein binding | nucleus | regulation of DNA-templated transcription | response to gibberellin
Show annotation evidence
eggNOG Preferred name: LOC104605218 | Seed ortholog: 337451.A0A443Q1B9 | COG: S | eggNOG OG: UNK.M0O3@131567|A-1*, UNK.M0O3@3398|Z-5, UNK.M0O3@58023|C-2
GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009739 response to gibberellin eggNOG GO
eggNOG-inferred Record JBrowse Workspace Select Pa12g1349 Pa12g1349 Pa12g1349.1Pa12g1349 | Pa12g1349.1 | rpa49 | 337451.A0A3S3P9Z8 | RNA_pol_I_A49@2759|A-1 | S | K03005 | 03020 | 00001 | 01611 | 03021 | RNA_pol_I_A49_67_422 | GO:0001179 | GO:0001188 | GO:0001650 | GO:0003677 | GO:0003899 | GO:0005515 | GO:0005575 | GO:0005634 | GO...
Show annotation evidence
eggNOG Preferred name: rpa49 | Seed ortholog: 337451.A0A3S3P9Z8 | COG: S | eggNOG OG: RNA_pol_I_A49@2759|A-1
GO GO:0001179 RNA polymerase I general transcription initiation factor binding; GO:0001188 RNA polymerase I preinitiation complex assembly; GO:0001650 fibrillar center; GO:0003677 DNA binding; GO:0003899 DNA-directed RNA polymerase activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005736 RNA polymerase I complex; GO:0006360...
KEGG KO: K03005 | Pathway: 03020 | BRITE: 00001, 01611, 03021 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1373 Pa12g1373 Pa12g1373.1…737 | GO:0005829 | GO:0006355 | transcription cis-regulatory region binding | DNA-binding transcription factor a ctivity | nucleus | cytoplasm | cytosol | regulation of DNA-templated transcription
Show annotation evidence
eggNOG Preferred name: POSF21 | Seed ortholog: 337451.A0A3S3P9Y8 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@3193|Afi-26, bZIP_1@33090|QU-15, bZIP_1@3398|BHr-28, bZIP_1@35493|ATZ-25
GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription
KEGG KO: K09043 | BRITE: 00001, 03000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1414 Pa12g1414 Pa12g1414.1…ntrapment activity | centromeric sister chromatid cohesion | lncRNA binding | DNA-binding transcription factor b inding
Show annotation evidence
eggNOG Preferred name: SYN4 | Seed ortholog: 337451.A0A443Q167 | COG: S | eggNOG OG: Rad21_Rec8@131567|AQ-7, Rad21_Rec8@33090|Ya-23, Rad21_Rec8_N@131567|A-1*, Rad21_Rec8_N@2759|Ae-8, Rad21_Rec8_N@33090|NW-16
GO GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006302 double-strand break repair; GO:0007062 sister chromatid cohesion; GO:0019901 protein kinase binding; GO:0043565 sequence-specific DNA binding; GO:0061776 ATP...
KEGG KO: K06670 | Pathway: 04110, 04111, 04113 | BRITE: 00001, 03036 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1417 Pa12g1417 Pa12g1417.1…ing | RNA polymerase II cis-regulatory region sequence-specific DNA binding | DNA-binding transcription factor a ctivity, RNA polymerase II-specific | cis-regulatory region sequence-specific DNA binding | transcription coregulator binding | transcription corepressor binding | transcription coactivato…
Show annotation evidence
eggNOG Preferred name: BnaA09g18260D | Seed ortholog: 337451.A0A3S3N6E1 | COG: S | eggNOG OG: HD-ZIP_N@131567|A-1*, HD-ZIP_N@3193|y-12, Homeodomain@131221|HaM-32, Homeodomain@131567|XU-17, Homeodomain@2759|ACU-20!, Homeodomain@3193|Tii-40, Homeodomain@35493|BwP-25
GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000781 chromosome, telomeric region; GO:0000785 chromatin; GO:0000976 transcription cis-regulatory region binding; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0000981 DNA-binding transcription factor activity,...
KEGG KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1557 Pa12g1557 Pa12g1557.1…051 | GO:0010089 | GO:0030154 | transcription cis-regulatory region binding | DNA-binding transcription factor a ctivity | protein binding | nucleus | determination of bilateral symmetry | polarity specification of adaxial/abaxial axis | radial pattern formation | meristem initiation | xylem and phlo…
Show annotation evidence
eggNOG Preferred name: REV | Seed ortholog: 337451.A0A443Q0W7 | COG: S | eggNOG OG: Homeodomain@131567|HP-13, Homeodomain@35493|BAJ-23, MEKHLA@131567|A-1, MEKHLA@35493|b-6, START@131567|e-5, START@2759|CL-9, START@3398|Ms-14, START@35493|JK-13
GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009855 determination of bilateral symmetry; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0009956 radial pattern formation; GO:0010014 meristem initiation; GO:0010051 xylem and phloem pattern formation; GO:0010089 xylem development; GO...
KEGG KO: K09338 | BRITE: 00001, 03000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1572 Pa12g1572 Pa12g1572.1…GO:0048366 | GO:0048441 | GO:0048442 | GO:0048589 | GO:0048829 | GO:0051301 | DNA-binding transcription factor a ctivity | protein binding | nucleus | pattern specification process | auxin-activated signaling pathway | abscisic acid-activated signaling pathway | response to carbohydrate | fruit devel…
Show annotation evidence
eggNOG Preferred name: ARF18 | Seed ortholog: 337451.A0A443Q0V6 | COG: S | eggNOG OG: Auxin_resp@131221|AX-8, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3398|Gd-14, B3@131221|AHw-20, B3@131567|A-1*, B3@3193|BOp-25, B3@33090|Id-12, B3@3398|CGu-29
GO GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007389 pattern specification process; GO:0009734 auxin-activated signaling pathway; GO:0009738 abscisic acid-activated signaling pathway; GO:0009743 response to carbohydrate; GO:0010154 fruit development; GO:0031540 regulation of anthocyanin biosynthetic process; GO:0035198 miRNA binding; GO:0048366 leaf...
KEGG KO: K14486 | Pathway: 04075 | BRITE: 00001 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1574 Pa12g1574 Pa12g1574.1…634 | GO:0007623 | GO:0009845 | transcription cis-regulatory region binding | DNA-binding transcription factor a ctivity | protein binding | nucleus | circadian rhythm | seed germination
Show annotation evidence
eggNOG Preferred name: GATA8 | Seed ortholog: 337451.A0A3S3P9Q9 | COG: S | eggNOG OG: GATA@131567|A-1*, GATA@1437183|Gm-13, GATA@2759|B-2!, GATA@3193|Ad-8, GATA@58023|EX-12
GO GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009845 seed germination
KEGG EC: ec:2.7.11.22, ec:2.8.1.7, ec:5.6.2.7, ec:6.3.2.2 | KO: K04487, K05626, K05628, K06669, K08817, K09182, K09183, K09184, K11204, K11339, K11648, K11660, K11770, K14809, K14972, K17604, K17894, K17895, K17896, K17897, K18658, K21630, K22040, K22184, K23194, K23407 | Pathway: 00270, 00480, 00730, 01100, 01240, 03082, 03250, 04022, 04122, 04218, 04530, 04658, 04659, 04919, 04928, 05321 | Module: M00118 | BRITE:... eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1598 Pa12g1598 Pa12g1598.1…nsed chromosome | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor a ctivity | protein binding | nucleus | nucleolus | cytosol | regulation of DNA-templated transcription | negative regulation of cell population proliferation | asymmetric cell division | re…
Show annotation evidence
eggNOG Preferred name: LOC104612238 | Seed ortholog: 337451.A0A3S3N665 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|KRE-43, Myb_DNA-binding@3193|GOC-39, Myb_DNA-binding@33090|Eca-37, Myb_DNA-binding@3398|HJp-40
GO GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO...
KEGG KO: K09422 | BRITE: 00001, 03000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1621 Pa12g1621 Pa12g1621.1Pa12g1621 | Pa12g1621.1 | Pa12g1621.2 | Pa12g1621.3 | Pa12g1621.4 | LOC107817073 | 337451.A0A3S3NQE0 | RRM_1@131567|Gk-13 | RRM_1@2759|DGP-27 | S | ec:2.1.1.354 | ec:2.7.7.19 | ec:2.7.7.52 | K03102 | K11422 | K12891 | K13172 | K14573 | K17391 | K18709 |...
Show annotation evidence
eggNOG Preferred name: LOC107817073 | Seed ortholog: 337451.A0A3S3NQE0 | COG: S | eggNOG OG: RRM_1@131567|Gk-13, RRM_1@2759|DGP-27
GO GO:0000398 mRNA splicing, via spliceosome; GO:0000785 chromatin; GO:0003677 DNA binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0005515 protein binding; GO:0005628 prospore membrane; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005847 mRNA cleavage and polyadenylation specificity factor complex; GO...
KEGG EC: ec:2.1.1.354, ec:2.7.7.19, ec:2.7.7.52 | KO: K03102, K11422, K12891, K13172, K14573, K17391, K18709, K22414, K22611, K24983, K25078 | Pathway: 00310, 01100, 03008, 03040, 04320 | BRITE: 00001, 01000, 03009, 03019, 03036, 03041, 04990 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1629 Pa12g1629 Pa12g1629.1…erase II | spermine transport | transcription cis-regulatory region binding | TFIIH-class transcription factor c omplex binding | molecular_function | transcription coactivator activity | protein binding | nucleus | regulation of DNA repair | DNA-templated transcription initiation | regulation of tra…
Show annotation evidence
eggNOG Preferred name: LOC103716825 | Seed ortholog: 337451.A0A3S3R7S2 | COG: S | eggNOG OG: TAFII55_N@2759|A-1
GO GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000296 spermine transport; GO:0000976 transcription cis-regulatory region binding; GO:0001097 TFIIH-class transcription factor complex binding; GO:0003674 molecular_function; GO:0003713 transcription coactivator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006282 regulation of DNA repair; GO:0006352 DNA-templated...
KEGG EC: ec:1.14.11.73 | KO: K03132 | Pathway: 03022 | BRITE: 00001, 03021, 03036 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace Select Pa12g1662 Pa12g1662 Pa12g1662.1…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor a ctivity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…
Show annotation evidence
eggNOG Preferred name: RGA3 | Seed ortholog: 337451.A0A443N8Q2 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|OwQ-46, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|uZ-15
GO GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG EC: ec:3.1.3.16 | KO: K14497, K16225, K16226 | Pathway: 04016, 04075, 04626 | BRITE: 00001, 01000 eggNOG GO KEGG
eggNOG-inferred Record JBrowse Workspace 