Pa12g0961

Functional evidence

eggNOG

Preferred name: LOC104595938 | Seed ortholog: 337451.A0A3S3N8Q7 | COG: S | eggNOG OG: DUF4219@131567|A-1*, DUF4219@2759|M-4!, Retrotran_gag_2@131567|sA-26, Retrotrans_gag@1437183|B-2!, zf-CCHC@131567|Em-12, zf-CCHC@2759|Gu-13!

Gene Ontology

GO:0000151 ubiquitin ligase complex; GO:0000175 3'-5'-RNA exonuclease activity; GO:0000243 commitment complex; GO:0000245 spliceosomal complex assembly; GO:0000278 mitotic cell cycle; GO:0000348 mRNA branch site recognition; GO:0000373 Group II intron splicing; GO:0000380 alternative mRNA splicing, via spliceosome; GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0000389 mRNA 3'-splice site recognition; GO:0000398 mRNA splicing, via spliceosome; GO:0000405 bubble DNA binding; GO:0000723 telomere maintenance; GO:0000781 chromosome, telomeric region; GO:0000932 P-body; GO:0000956 nuclear-transcribed mRNA catabolic process; GO:0000967 rRNA 5'-end processing; GO:0001501 skeletal system development; GO:0001556 oocyte maturation; GO:0001708 cell fate specification; GO:0002119 nematode larval development; GO:0002151 G-quadruplex RNA binding; GO:0002190 cap-independent translational initiation; GO:0002192 IRES-dependent translational initiation of linear mRNA; GO:0002218 activation of innate immune response; GO:0003674 molecular_function; GO:0003676 nucleic acid binding; GO:0003682 chromatin binding; GO:0003690 double-stranded DNA binding; GO:0003697 single-stranded DNA binding; GO:0003714 transcription corepressor activity; GO:0003723 RNA binding; GO:0003724 RNA helicase activity; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0004534 5'-3' RNA exonuclease activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005681 spliceosomal complex; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005739 mitochondrion; GO:0005773 vacuole; GO:0005783 endoplasmic reticulum; GO:0005791 rough endoplasmic reticulum; GO:0005829 cytosol; GO:0005840 ribosome; GO:0005886 plasma membrane; GO:0006260 DNA replication; GO:0006338 chromatin remodeling; GO:0006396 RNA processing; GO:0006401 RNA catabolic process; GO:0006402 mRNA catabolic process; GO:0006417 regulation of translation; GO:0006511 ubiquitin-dependent protein catabolic process; GO:0007276 gamete generation; GO:0007281 germ cell development; GO:0007300 ovarian nurse cell to oocyte transport; GO:0007472 wing disc morphogenesis; GO:0007562 eclosion; GO:0007623 circadian rhythm; GO:0008062 eclosion rhythm; GO:0008104 intracellular protein localization; GO:0008150 biological_process; GO:0008270 zinc ion binding; GO:0008284 positive regulation of cell population proliferation; GO:0008380 RNA splicing; GO:0008432 JUN kinase binding; GO:0008494 translation activator activity; GO:0009269 response to desiccation; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009536 plastid; GO:0009570 chloroplast stroma; GO:0009597 detection of virus; GO:0009631 cold acclimation; GO:0009651 response to salt stress; GO:0009658 chloroplast organization; GO:0009737 response to abscisic acid; GO:0009791 post-embryonic development; GO:0009792 embryo development ending in birth or egg hatching; GO:0009793 embryo development ending in seed dormancy; GO:0009826 unidimensional cell growth; GO:0009941 chloroplast envelope; GO:0010087 phloem or xylem histogenesis; GO:0010154 fruit development; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0010286 heat acclimation; GO:0010468 regulation of gene expression; GO:0010494 cytoplasmic stress granule; GO:0010586 miRNA metabolic process; GO:0010587 miRNA catabolic process; GO:0010608 post-transcriptional regulation of gene expression; GO:0010628 positive regulation of gene expression; GO:0010629 negative regulation of gene expression; GO:0014029 neural crest formation; GO:0014036 neural crest cell fate specification; GO:0016070 RNA metabolic process; GO:0016076 snRNA catabolic process; GO:0016604 nuclear body; GO:0016607 nuclear speck; GO:0016887 ATP hydrolysis activity; GO:0017148 negative regulation of translation; GO:0017151 DEAD/H-box RNA helicase binding; GO:0019827 stem cell population maintenance; GO:0019899 enzyme binding; GO:0020023 kinetoplast; GO:0030036 actin cytoskeleton organization; GO:0030238 male sex determination; GO:0030332 cyclin binding; GO:0030575 nuclear body organization; GO:0030902 hindbrain development; GO:0031016 pancreas development; GO:0031054 pre-miRNA processing; GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA; GO:0031099 regeneration; GO:0031123 RNA 3'-end processing; GO:0031124 mRNA 3'-end processing; GO:0031369 translation initiation factor binding; GO:0031499 TRAMP complex; GO:0031664 regulation of lipopolysaccharide-mediated signaling pathway; GO:0031982 vesicle; GO:0032008 positive regulation of TOR signaling; GO:0032055 negative regulation of translation in response to stress; GO:0032357 oxidized purine DNA binding; GO:0032481 positive regulation of type I interferon production; GO:0032755 positive regulation of interleukin-6 production; GO:0032922 circadian regulation of gene expression; GO:0032991 protein-containing complex; GO:0033327 Leydig cell differentiation; GO:0034399 nuclear periphery; GO:0035198 miRNA binding; GO:0035278 miRNA-mediated gene silencing by inhibition of translation; GO:0035773 insulin secretion involved in cellular response to glucose stimulus; GO:0035883 enteroendocrine cell differentiation; GO:0036002 pre-mRNA binding; GO:0036464 cytoplasmic ribonucleoprotein granule; GO:0040009 regulation of growth rate; GO:0040029 epigenetic regulation of gene expression; GO:0040034 regulation of development, heterochronic; GO:0042127 regulation of cell population proliferation; GO:0042254 ribosome biogenesis; GO:0042464 dosage compensation by hypoactivation of X chromosome; GO:0042551 neuron maturation; GO:0042593 glucose homeostasis; GO:0042659 regulation of cell fate specification; GO:0042742 defense response to bacterium; GO:0042752 regulation of circadian rhythm; GO:0042802 identical protein binding; GO:0043009 chordate embryonic development; GO:0043124 negative regulation of canonical NF-kappaB signal transduction; GO:0043138 3'-5' DNA helicase activity; GO:0043153 entrainment of circadian clock by photoperiod; GO:0043186 P granule; GO:0043457 regulation of cellular respiration; GO:0043473 pigmentation; GO:0043565 sequence-specific DNA binding; GO:0045131 pre-mRNA branch point binding; GO:0045182 translation regulator activity; GO:0045292 mRNA cis splicing, via spliceosome; GO:0045475 locomotor rhythm; GO:0045666 positive regulation of neuron differentiation; GO:0045686 negative regulation of glial cell differentiation; GO:0045727 positive regulation of translation; GO:0045804 negative regulation of eclosion; GO:0045875 negative regulation of sister chromatid cohesion; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0045947 negative regulation of translational initiation; GO:0045995 regulation of embryonic development; GO:0046626 regulation of insulin receptor signaling pathway; GO:0046685 response to arsenic-containing substance; GO:0046822 regulation of nucleocytoplasmic transport; GO:0048316 seed development; GO:0048443 stamen development; GO:0048471 perinuclear region of cytoplasm; GO:0048662 negative regulation of smooth muscle cell proliferation; GO:0048703 embryonic viscerocranium morphogenesis; GO:0048705 skeletal system morphogenesis; GO:0048863 stem cell differentiation; GO:0050265 RNA uridylyltransferase activity; GO:0050727 regulation of inflammatory response; GO:0050779 RNA destabilization; GO:0050810 regulation of steroid biosynthetic process; GO:0051149 positive regulation of muscle cell differentiation; GO:0051216 cartilage development; GO:0051301 cell division; GO:0051607 defense response to virus; GO:0051897 positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; GO:0060149 negative regulation of post-transcriptional gene silencing; GO:0060322 head development; GO:0060964 regulation of miRNA-mediated gene silencing; GO:0061820 telomeric D-loop disassembly; GO:0061821 telomeric D-loop binding; GO:0062141 nuclear exosome targeting complex; GO:0070062 extracellular exosome; GO:0070102 interleukin-6-mediated signaling pathway; GO:0070370 cellular heat acclimation; GO:0070417 cellular response to cold; GO:0070569 uridylyltransferase activity; GO:0070878 primary miRNA binding; GO:0070883 pre-miRNA binding; GO:0071004 U2-type prespliceosome; GO:0071011 precatalytic spliceosome; GO:0071013 catalytic step 2 spliceosome; GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process; GO:0071333 cellular response to glucose stimulus; GO:0071360 cellular response to exogenous dsRNA; GO:0071466 cellular response to xenobiotic stimulus; GO:0071470 cellular response to osmotic stress; GO:0089701 U2AF complex; GO:0097157 pre-mRNA intronic binding; GO:0097158 pre-mRNA intronic pyrimidine-rich binding; GO:0097167 circadian regulation of translation; GO:0140517 protein-RNA adaptor activity; GO:0140691 RNA folding chaperone; GO:0141008 transposable element silencing by mRNA destabilization; GO:0180034 co-transcriptional lncRNA 3' end processing, cleavage and polyadenylation pathway; GO:1900246 positive regulation of RIG-I signaling pathway; GO:1901724 positive regulation of cell proliferation involved in kidney development; GO:1990074 polyuridylation-dependent mRNA catabolic process; GO:1990715 mRNA CDS binding; GO:1990825 sequence-specific mRNA binding; GO:1990837 sequence-specific double-stranded DNA binding; GO:2000627 positive regulation of miRNA catabolic process; GO:2000632 negative regulation of pre-miRNA processing; GO:2000635 negative regulation of primary miRNA processing; GO:2000637 positive regulation of miRNA-mediated gene silencing; GO:2000767 positive regulation of cytoplasmic translation

KEGG

EC: ec:2.3.1.199, ec:2.3.2.27, ec:2.4.1.1, ec:2.4.1.99, ec:2.7.7.23, ec:2.7.7.52, ec:2.7.7.7, ec:2.7.7.83, ec:3.1.4.1, ec:3.4.19.12, ec:3.5.4.12, ec:3.5.4.19, ec:3.6.1.31, ec:4.2.99.18, ec:5.6.2.1, ec:5.6.2.3, ec:5.6.2.4, ec:5.6.2.5, ec:5.6.2.7 | KO: K03260 | Pathway: 00062, 00240, 00340, 00500, 00520, 01100, 01110, 01230, 01232, 01250, 02010, 03008, 03015, 03018, 03030, 03040, 03410, 03420, 03430, 03440, 03450, 04016, 04217, 04623, 04626, 04910, 05014, 05168 | Module: M00026, M00415, M00855, M00892 | BRITE: 00001, 03012, 03019