Pa06g2175.4

West Indian T2T · mRNA

Pa06g2175.4

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

6,198
bp
Pa06:51,015,961–51,362,183
genomic location
Record overview

Feature identity

Identifier
Pa06g2175.4
Feature type
mRNA
Genome collection
West Indian T2T
Organism
Persea americana-West Indian
Sequence length
6,198 bp
Genomic location
Pa06:51,015,961–51,362,183
Strand
−
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

Functional index matched identifier: Pa06g2175

eggNOG
Preferred name: BTAF1 | Seed ortholog: 337451.A0A3S3NX02 | COG: S | eggNOG OG: DUF3535@2759|A-1, Helicase_C|PA5U5V@131567, Helicase_C|PA5U5V@2759, SNF2-rel_dom@131567|BD-7
Gene Ontology
GO:0003677 DNA binding; GO:0003712 transcription coregulator activity; GO:0003723 RNA binding; GO:0004386 helicase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008094 ATP-dependent activity, acting on DNA; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding; GO:0042802 identical protein binding; GO:0140658 ATP-dependent chromatin remodeler activity; GO:1902185 positive regulation of shoot apical meristem development
KEGG
KO: K15192 | Pathway: 03082 | BRITE: 00001, 03021
Biological context

Connected feature records

Follow parent–child relationships among genes, transcripts, coding regions, and protein products.

Tripal Logo
Tripal Logo
Tripal Logo

© 2026 PerseaDB. How to cite PerseaDB 琼ICP备2026011956号