Feature identity
- Identifier
- Pa06g2175
- Feature type
- gene
- Genome collection
- West Indian T2T
- Organism
- Persea americana-West Indian
- Sequence length
- 390,861 bp
- Genomic location
- Pa06:50,971,323–51,362,183
- Strand
- −
West Indian T2T · gene
Pa06g2175
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 390,861
- bp
- Pa06:50,971,323–51,362,183
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: BTAF1 | Seed ortholog: 337451.A0A3S3NX02 | COG: S | eggNOG OG: DUF3535@2759|A-1, Helicase_C|PA5U5V@131567, Helicase_C|PA5U5V@2759, SNF2-rel_dom@131567|BD-7
- Gene Ontology
- GO:0003677 DNA binding; GO:0003712 transcription coregulator activity; GO:0003723 RNA binding; GO:0004386 helicase activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0008094 ATP-dependent activity, acting on DNA; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0016887 ATP hydrolysis activity; GO:0017025 TBP-class protein binding; GO:0042802 identical protein binding; GO:0140658 ATP-dependent chromatin remodeler activity; GO:1902185 positive regulation of shoot apical meristem development
- KEGG
- KO: K15192 | Pathway: 03082 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPa06g2175.1
part_ofgenePa06g2175
mRNAPa06g2175.2
part_ofgenePa06g2175
mRNAPa06g2175.3
part_ofgenePa06g2175
mRNAPa06g2175.4
part_ofgenePa06g2175
mRNAPa06g2175.5
part_ofgenePa06g2175
mRNAPa06g2175.6
part_ofgenePa06g2175
mRNAPa06g2175.7
part_ofgenePa06g2175
