Feature identity
- Identifier
- PaHa05g25000
- Feature type
- gene
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,300 bp
- Genomic location
- 5:68,213,537–68,250,445
- Strand
- −
Hass · gene
PaHa05g25000
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,300
- bp
- 5:68,213,537–68,250,445
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
- eggNOG
- Preferred name: VIP6 | Seed ortholog: 337451.A0A3S3NM86 | COG: COG4783 | eggNOG OG: TPR_7@131567|G-3, TPR_8@131567|oY-16
- Gene Ontology
- GO:0000993 RNA polymerase II complex binding; GO:0003674 molecular_function; GO:0003712 transcription coregulator activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009910 negative regulation of flower development; GO:0016593 Cdc73/Paf1 complex; GO:0042169 SH2 domain binding; GO:0045142 triplex DNA binding; GO:0045893 positive regulation of DNA-templated transcription; GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding; GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding
- KEGG
- KO: K15176 | Pathway: 05160 | BRITE: 00001, 03021
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
mRNAPaHa05g25000.1
part_ofgenePaHa05g25000
