Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

32,046
West Indian T2T annotations
3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,385 genes for “transcription factor”

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Pa01g3190Pa01g3190.1

…GO:0009845 | GO:0009959 | GO:0010187 | GO:0010218 | GO:0043565 | GO:0090351 | DNA-binding transcription factor activity | protein binding | nucleus | DNA-templated transcription | regulation of DNA-templated transcription | response to light stimulus | plasmodesma | double fertilization forming a zy…

Show annotation evidence
eggNOG
Preferred name: UNE10 | Seed ortholog: 337451.A0A3S3Q8G0 | COG: S | eggNOG OG: HLH@131221|BVX-22, HLH@131567|Zg-14!, HLH@3193|CEo-24, HLH@33090|AbI-19, HLH@3398|KBj-34, HLH@35493|AqB-20, HLH@58023|GdY-31
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0006355 regulation of DNA-templated transcription; GO:0009416 response to light stimulus; GO:0009506 plasmodesma; GO:0009567 double fertilization forming a zygote and endosperm; GO:0009637 response to blue light; GO:0009704 de-etiolation; GO:0009753 response to jasmonic...
KEGG
KO: K12126 | Pathway: 04075, 04712 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3192Pa01g3192.1

…634 | GO:0005737 | GO:0006355 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | cytoplasm | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: ZAT4 | Seed ortholog: 337451.A0A3S4NRI9 | COG: S | eggNOG OG: zf-C2H2_6@131567|B-2, zf-C2H2_6@1437183|Rt-17, zf-C2H2_6@3398|DU-12
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa01g3209Pa01g3209.1

…154 | GO:0048768 | GO:0051301 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | circadian rhythm | cell differentiation | root hair cell tip growth | cell division

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eggNOG
Preferred name: SCL6 | Seed ortholog: 337451.A0A3S3NJ24 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|CH-12, GRAS@3398|JO-16, GRAS@58023|DN-13
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0030154 cell differentiation; GO:0048768 root hair cell tip growth; GO:0051301 cell division
KEGG
KO: K27747 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3210Pa01g3210.1

…154 | GO:0048768 | GO:0051301 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | circadian rhythm | cell differentiation | root hair cell tip growth | cell division

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eggNOG
Preferred name: SCL6 | Seed ortholog: 337451.A0A3S3NJ24 | COG: S | eggNOG OG: GRAS@131567|n-8, GRAS@3193|CH-12, GRAS@3398|JO-16, GRAS@58023|DN-13
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0030154 cell differentiation; GO:0048768 root hair cell tip growth; GO:0051301 cell division
KEGG
KO: K27747 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3223Pa01g3223.1

…706 | GO:1902183 | GO:2000024 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | regulation of flower development | meristem structural organization | polarity specification of adaxial/ab…

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eggNOG
Preferred name: YAB1 | Seed ortholog: 337451.A0A3S4NRK7 | COG: S | eggNOG OG: YABBY@2759|C-2!, YABBY@3398|Cc-11
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009909 regulation of flower development; GO:0009933 meristem structural organization; GO:0009944 polarity specification of adaxial/abaxial axis; GO:0010093 specification of floral organ identity; GO...
KEGG
KO: K25796 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3225Pa01g3225.1

…759 | GO:0090058 | GO:1901348 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | secondary cell wall | response to fungus | response to auxin | response to cytokinin | response to abscisi…

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eggNOG
Preferred name: NAC007 | Seed ortholog: 337451.A0A3S3MIM3 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|CeJ-27, NAM@35493|AE-6, NAM@58023|AGB-18
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009531 secondary cell wall; GO:0009620 response to fungus; GO:0009733 response to auxin; GO:0009735 response to cytokinin; GO:0009737 response to abscisic acid; GO:0009741 response to brassinosteroid;...
eggNOGGO
eggNOG-inferred
Pa01g3301Pa01g3301.1

Pa01g3301 | Pa01g3301.1 | LSMT-L | 337451.A0A3S3Q7E2 | SET@131567|Gx-10 | SET@2759|NU-12! | S | ec:2.1.1.354 | ec:2.1.1.355 | ec:2.1.1.357 | ec:2.1.1.361 | ec:2.1.1.362 | ec:2.1.1.85 | ec:2.7.4.14 | K06101 | K11419 | K11428 | K11429 | K11433 | K13800 |...

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eggNOG
Preferred name: LSMT-L | Seed ortholog: 337451.A0A3S3Q7E2 | COG: S | eggNOG OG: SET@131567|Gx-10, SET@2759|NU-12!
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000902 cell morphogenesis; GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0001708 cell fate specification; GO:0001827 inner cell mass cell fate commitment; GO:0003682 chromatin binding; GO:0003723 RNA binding;...
KEGG
EC: ec:2.1.1.354, ec:2.1.1.355, ec:2.1.1.357, ec:2.1.1.361, ec:2.1.1.362, ec:2.1.1.85, ec:2.7.4.14 | KO: K06101, K11419, K11428, K11429, K11433, K13800, K19199, K20795, K20796, K22748, K24255, K24644, K24645, K24646 | Pathway: 00240, 00310, 01100, 01232, 01240 | Module: M00052 | BRITE: 00001, 01000, 03000, 03036, 04812
eggNOGGOKEGG
eggNOG-inferred
Pa01g3304Pa01g3304.1

…binding | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to cold | response to water deprivation | cold acclimation | positive regulation of gene expression | glucosinolate metabolic process | posit…

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eggNOG
Preferred name: DREB1A | Seed ortholog: 337451.A0A443NQE1 | COG: S | eggNOG OG: AP2@131567|DU-11, AP2@1437183|DKp-29, AP2@33090|KR-15, AP2@3398|AmE-24, AP2@58023|ld-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009631 cold acclimation; GO:0010628 positive regulation of gene expression; GO:0019760...
KEGG
KO: K09286 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3341Pa01g3341.1

…364 | GO:0048497 | GO:0048765 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | plant-type cell wall modification | cutin biosynthetic process | cell differentiation | cuticle development | anthocyanin accumulation in tissues in r…

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eggNOG
Preferred name: ANL2 | Seed ortholog: 337451.A0A3S3MC07 | COG: S | eggNOG OG: Homeodomain@131567|Fe-12, Homeodomain@1437183|JKv-33, Homeodomain@3193|EBp-28, Homeodomain@3398|Erx-29, Homeodomain@35493|DQH-27, START@131567|e-5, START@2759|CM-9!, START@3398|AxM-24, START@35493|tP-19, START@58023|ACB-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009827 plant-type cell wall modification; GO:0010143 cutin biosynthetic process; GO:0030154 cell differentiation; GO:0042335 cuticle development; GO:0043481 anthocyanin accumulation in tissues in response to UV light; GO:0048364 root development; GO...
KEGG
KO: K09338 | Pathway: 04814 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3353Pa01g3353.1

…nsed chromosome | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus | cytosol | regulation of DNA-templated transcription | negative regulation of cell population proliferation | asymmetric cell division | re…

Show annotation evidence
eggNOG
Preferred name: LOC107759231 | Seed ortholog: 337451.A0A3S3MQZ2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@33090|DqE-36, Myb_DNA-binding@35493|FSr-38, Myb_DNA-binding@58023|HJt-40
GO
GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3356Pa01g3356.1

…O:0071491 | transcription cis-regulatory region binding | chromatin binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to cold | response to light stimulus | response to red or far red light | seed germination | posi…

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eggNOG
Preferred name: DOF3.7 | Seed ortholog: 4432.A0A1U7ZI96 | COG: S | eggNOG OG: zf-Dof@131567|A-1*, zf-Dof@1437183|AGE-21, zf-Dof@3193|Bv-8, zf-Dof@33090|d-5, zf-Dof@3398|GQ-11, zf-Dof@58023|DA-9
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003682 chromatin binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009416 response to light stimulus; GO:0009639 response to red or far red light; GO:0009845 seed germination; GO:0010030 positive regulation of...
eggNOGGO
eggNOG-inferred
Pa01g3360Pa01g3360.1

…GO:0010089 | GO:0048316 | GO:0048364 | GO:0051321 | GO:0071365 | GO:0090058 | DNA-binding transcription factor activity | protein binding | nucleus | male meiotic nuclear division | chloroplast | xylem development | seed development | root development | meiotic cell cycle | cellular response to auxi…

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eggNOG
Preferred name: LHW | Seed ortholog: 337451.A0A443NQJ5 | COG: S | eggNOG OG: bHLH-MYC_N@131567|A-1*, bHLH-MYC_N@2759|B-2, bHLH-MYC_N@3193|m-7, bHLH-MYC_N@3398|AU-9
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0007140 male meiotic nuclear division; GO:0009507 chloroplast; GO:0010089 xylem development; GO:0048316 seed development; GO:0048364 root development; GO:0051321 meiotic cell cycle; GO:0071365 cellular response to auxin stimulus; GO:0090058 metaxylem development
eggNOGGO
eggNOG-inferred
Pa01g3408Pa01g3408.1

…802 | GO:0043565 | GO:0045893 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | plant-type secondary cell wall biogenesis | fruit dehiscence | identical protein binding | sequence-specific DNA binding | positive regulation of DNA-…

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eggNOG
Preferred name: NAC043 | Seed ortholog: 337451.A0A3S5WGP8 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|APz-19, NAM@35493|AE-6, NAM@58023|AGC-18
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0010047 fruit dehiscence; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa01g3409Pa01g3409.1

…802 | GO:0043565 | GO:0045893 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | plant-type secondary cell wall biogenesis | fruit dehiscence | identical protein binding | sequence-specific DNA binding | positive regulation of DNA-…

Show annotation evidence
eggNOG
Preferred name: NAC043 | Seed ortholog: 337451.A0A3S3MC49 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|APz-19, NAM@35493|AE-6, NAM@58023|AGC-18
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0010047 fruit dehiscence; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa01g3412Pa01g3412.1

…802 | GO:0043565 | GO:0045893 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | plant-type secondary cell wall biogenesis | fruit dehiscence | identical protein binding | sequence-specific DNA binding | positive regulation of DNA-…

Show annotation evidence
eggNOG
Preferred name: NAC043 | Seed ortholog: 337451.A0A3S3MC49 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|om-16, NAM@3398|APz-19, NAM@35493|AE-6, NAM@58023|AGC-18
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009834 plant-type secondary cell wall biogenesis; GO:0010047 fruit dehiscence; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa01g3442Pa01g3442.1

…752 | GO:0042754 | GO:0048574 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | circadian rhythm | response to cold | regulation of circadian rhythm | negative regulation of circadian rhythm | long-day ph…

Show annotation evidence
eggNOG
Preferred name: LHY | Seed ortholog: 337451.A0A443NQR2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uI-23, Myb_DNA-binding@2759|yY-24, Myb_DNA-binding@3398|DIF-35
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009409 response to cold; GO:0042752 regulation of circadian rhythm; GO:0042754 negative regulation of circadian rhythm; GO:0048574 long-day photoperiodism, flowering
KEGG
EC: ec:3.4.21.102 | KO: K12133 | Pathway: 04712 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3447Pa01g3447.1

…GO:0005634 | GO:0006355 | GO:0009908 | GO:0048366 | GO:0048480 | GO:1901371 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | flower development | leaf development | stigma development | regulation of leaf morphogenesis

Show annotation evidence
eggNOG
Preferred name: LOC104585775 | Seed ortholog: 337451.A0A443NQR4 | COG: S | eggNOG OG: AP2@131567|Bx-9, AP2@58023|Hy-14, B3@131567|A-1*, B3@33090|zE-19, B3@35493|BDn-24, B3@58023|CfD-31
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009908 flower development; GO:0048366 leaf development; GO:0048480 stigma development; GO:1901371 regulation of leaf morphogenesis
KEGG
KO: K09287 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3450Pa01g3450.1

…333 | GO:0071472 | GO:2000039 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | endoplasmic reticulum | plasma membrane | plant-type hypersensitive response | response to salt stress | response to gibberellin | seed germination | …

Show annotation evidence
eggNOG
Preferred name: NTL8 | Seed ortholog: 337451.A0A443NQS0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|bY-14, NAM@3398|AGu-18, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0009626 plant-type hypersensitive response; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009845 seed germination; GO:0009910 negative regulation of flower...
eggNOGGO
eggNOG-inferred
Pa01g3451Pa01g3451.1

…333 | GO:0071472 | GO:2000039 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | endoplasmic reticulum | plasma membrane | plant-type hypersensitive response | response to salt stress | response to gibberellin | seed germination | …

Show annotation evidence
eggNOG
Preferred name: NTL8 | Seed ortholog: 337451.A0A443NQS0 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|bY-14, NAM@3398|AGu-18, NAM@35493|AE-6
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005783 endoplasmic reticulum; GO:0005886 plasma membrane; GO:0009626 plant-type hypersensitive response; GO:0009651 response to salt stress; GO:0009739 response to gibberellin; GO:0009845 seed germination; GO:0009910 negative regulation of flower...
eggNOGGO
eggNOG-inferred
Pa01g3459Pa01g3459.1

…70 | GO:0042762 | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | ethylene-activated signaling pathway | cellular response to sulfate starvation | regulation of sulfur meta…

Show annotation evidence
eggNOG
Preferred name: EIL3 | Seed ortholog: 337451.A0A443N452 | COG: S | eggNOG OG: EIN3@131567|A-1*, EIN3@35493|J-4
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009873 ethylene-activated signaling pathway; GO:0009970 cellular response to sulfate starvation; GO:0042762 regulation of sulfur metabolic process
KEGG
KO: K14514 | Pathway: 04016, 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3477Pa01g3477.1

…O:0042631 | GO:0043565 | GO:0045892 | GO:2000037 | GO:2000038 | DNA binding | DNA-binding transcription factor activity | nucleus | DNA-templated transcription | regulation of cell size | response to water deprivation | trichome morphogenesis | negative regulation of cell growth | negative regulatio…

Show annotation evidence
eggNOG
Preferred name: LOC103708474 | Seed ortholog: 337451.A0A443NQV0 | eggNOG OG: Myb_DNA-bind_4@131567|B-2, Myb_DNA-bind_4@3193|FG-12
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006351 DNA-templated transcription; GO:0008361 regulation of cell size; GO:0009414 response to water deprivation; GO:0010090 trichome morphogenesis; GO:0030308 negative regulation of cell growth; GO:0032876 negative regulation of DNA endoreduplication; GO:0042631 cellular response to water deprivation; GO:0043565...
eggNOGGO
eggNOG-inferred
Pa01g3496Pa01g3496.1

…nsed chromosome | transcription cis-regulatory region binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleolus | cytosol | regulation of DNA-templated transcription | negative regulation of cell population proliferation | asymmetric cell division | re…

Show annotation evidence
eggNOG
Preferred name: BnaA09g11780D | Seed ortholog: 337451.A0A443NQV5 | COG: S | eggNOG OG: Myb_DNA-binding@131221|LYW-44, Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@3193|Mih-45, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|PHs-47, Myb_DNA-binding@35493|IIv-41
GO
GO:0000793 condensed chromosome; GO:0000976 transcription cis-regulatory region binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0008356 asymmetric cell division; GO...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3503Pa01g3503.1

…GO:0010114 | GO:0032922 | GO:0042752 | GO:0043153 | GO:2000024 | GO:2000028 | DNA-binding transcription factor activity | nucleus | circadian rhythm | response to blue light | regulation of photomorphogenesis | response to red light | circadian regulation of gene expression | regulation of circadian…

Show annotation evidence
eggNOG
Preferred name: ASG4 | Seed ortholog: 337451.A0A3S5WGQ2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|uI-23, Myb_DNA-binding@2759|yY-24, Myb_DNA-binding@33090|INd-41, Myb_DNA-binding@3398|PWh-47
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0007623 circadian rhythm; GO:0009637 response to blue light; GO:0010099 regulation of photomorphogenesis; GO:0010114 response to red light; GO:0032922 circadian regulation of gene expression; GO:0042752 regulation of circadian rhythm; GO:0043153 entrainment of circadian clock by photoperiod; GO:2000024 regulation of leaf development; GO...
KEGG
EC: ec:3.4.21.102 | KO: K03797, K11314, K12133, K12134, K15127 | Pathway: 04712 | BRITE: 00001, 01000, 01002, 03000, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa01g3514Pa01g3514.1

…GO:0003700 | GO:0005515 | GO:0005634 | GO:0005829 | GO:0009506 | GO:0048481 | DNA-binding transcription factor activity | protein binding | nucleus | cytosol | plasmodesma | plant ovule development

Show annotation evidence
eggNOG
Preferred name: BEL1 | Seed ortholog: 337451.A0A443NQY0 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@1437183|XZ-18, Homeobox_KN@2759|C-2!, Homeobox_KN@3398|Lx-15, Homeobox_KN@58023|Dh-11, POX@131567|A-1*, POX@1437183|BX-13, POX@3193|V-7, POX@3398|z-10
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0009506 plasmodesma; GO:0048481 plant ovule development
KEGG
EC: ec:2.1.1.354 | KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 | Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 | BRITE: 00001, 01000, 03000, 03036
eggNOGGOKEGG
eggNOG-inferred
Pa01g3524Pa01g3524.1

…001 | GO:0080112 | GO:2000652 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | nucleus | xylem development | mucilage biosynthetic process | seed coat development | negative regulation of DNA-templated transcription | mucilage extrusion from seed coat | see…

Show annotation evidence
eggNOG
Preferred name: KNAT7 | Seed ortholog: 337451.A0A443NQX9 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@2759|B-2, Homeobox_KN@3193|Bz-10, KNOX1@131567|A-1*, KNOX1@33090|C-2, KNOX1@3398|p-7, KNOX2@131567|A-1*, KNOX2@3193|L-4, KNOX2@35493|C-2
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0010089 xylem development; GO:0010192 mucilage biosynthetic process; GO:0010214 seed coat development; GO:0045892 negative regulation of DNA-templated transcription; GO:0080001 mucilage extrusion from seed coat; GO:0080112 seed growth; GO:2000652 regulation of secondary cell wall...
eggNOGGO
eggNOG-inferred
Pa01g3528Pa01g3528.1

…228 | GO:0048510 | GO:2000012 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | vernalization response | maintenance of floral meristem identity | regulation of root meristem growth | vegetative to reproductive phase t…

Show annotation evidence
eggNOG
Preferred name: MADS50 | Seed ortholog: 337451.A0A3S3MWM9 | COG: S | eggNOG OG: K-box@131221|AA-6, K-box@131567|A-1*, K-box@2759|O-4, K-box@3398|HO-11!, SRF-TF@131567|A-1*, SRF-TF@1437183|Djk-33, SRF-TF@2759|C-2!, SRF-TF@3398|BYA-27
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0010048 vernalization response; GO:0010076 maintenance of floral meristem identity; GO:0010082 regulation of root meristem growth; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0048510 regulation of timing of...
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
Pa01g3529Pa01g3529.1

…O:0048481 | GO:0048509 | GO:0048833 | GO:0080060 | GO:0080112 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | embryo sac development | pollen development | meristem determinacy | specification of floral organ identity | specification of carpel identity | regul…

Show annotation evidence
eggNOG
Preferred name: MADS6 | Seed ortholog: 13333.W1NLY8, 337451.A0A443NQY7 | COG: S | eggNOG OG: K-box@131567|A-1*, K-box@2759|Ah-7, K-box@3398|EM-10, SRF-TF@131567|A-1*, SRF-TF@2759|C-2!, SRF-TF@3193|jV-20, SRF-TF@3398|BFm-26, SRF-TF@35493|bP-19
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009553 embryo sac development; GO:0009555 pollen development; GO:0010022 meristem determinacy; GO:0010093 specification of floral organ identity; GO:0010094 specification of carpel identity; GO:0010468 regulation of gene expression; GO:0010582 floral meristem determinacy; GO:0045893...
KEGG
KO: K09264 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
Pa01g3535Pa01g3535.1

… | HLH@35493|AbE-19 | S | HLH_79_144 | GO:0003700 | GO:0005634 | GO:0006355 | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription

Show annotation evidence
eggNOG
Preferred name: BHLH36 | Seed ortholog: 337451.A0A3S3MCC0 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|Apu-20, HLH@33090|AAF-17, HLH@3398|CXq-25, HLH@35493|AbE-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
eggNOGGO
eggNOG-inferred
Pa01g3536Pa01g3536.1

Pa01g3536 | Pa01g3536.1 | Pa01g3536.2 | LOC106777822 | 337451.A0A3S3N525 | YTH@131567|A-1* | YTH@2759|AD-7 | S | K20100 | 03015 | 00001 | 03041 | YTH_134_269 | GO:0000381 | GO:0000398 | GO:0001701 | GO:0003723 | GO:0003729 | GO:0004519 | GO:0004521 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC106777822 | Seed ortholog: 337451.A0A3S3N525 | COG: S | eggNOG OG: YTH@131567|A-1*, YTH@2759|AD-7
GO
GO:0000381 regulation of alternative mRNA splicing, via spliceosome; GO:0000398 mRNA splicing, via spliceosome; GO:0001701 in utero embryonic development; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0004519 endonuclease activity; GO:0004521 RNA endonuclease activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005847 mRNA...
KEGG
KO: K20100 | Pathway: 03015 | BRITE: 00001, 03041
eggNOGGOKEGG
eggNOG-inferred
Pa01g3563Pa01g3563.1

…RNA polymerase II transcription regulator complex | M/G1 phase-specific MADS box-forkhead transcription factor complex | sympathetic neuron axon guidance | cell-cell adhesion | NMDA selective glutamate receptor signaling pathway | AMPA selective glutamate receptor signaling pathway | adenylate cycla…

Show annotation evidence
eggNOG
Preferred name: MADS23 | Seed ortholog: 337451.A0A443NNC6 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|BB-11, SRF-TF@2759|C-2!, SRF-TF@3193|Ae-10
GO
GO:0000086 G2/M transition of mitotic cell cycle; GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000165 MAPK cascade; GO:0000785 chromatin; GO:0001568 blood vessel development; GO:0001569 branching involved in blood vessel morphogenesis; GO:0001649 osteoblast differentiation; GO:0001666 response to hypoxia; GO:0001701 in utero embryonic development; GO:0001707 mesoderm formation; GO...
KEGG
KO: K12412 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred

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