Functional discovery

Search genes by biological annotation

Search integrated eggNOG, Gene Ontology, and KEGG evidence with phrases such as fatty acid, lipid metabolism, kinase, or transcription factor.

33,382
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3+
indexed evidence types

Keyword matching is case-insensitive. Results remain collection-specific and represent computational annotation evidence, not experimental validation.

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2,418 genes for “transcription factor”

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PaHa11g21500PaHa11g21500.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC123119075 | Seed ortholog: 4540.A0A3L6PSE3 | COG: S | eggNOG OG: LRR_1@131567|ATg-18, LRR_1@147369|NKk-39, LRR_1@33090|ByH-22, LRR_1@4479|Lqr-37, NB-ARC@131567|AC-6, NB-ARC@1437183|DMQ-31, NB-ARC@147369|RMA-48, NB-ARC@3193|CRk-29, NB-ARC@35493|Aho-23, NB-ARC@38820|Dmp-32, NB-ARC@4479|OAR-45, NB-ARC@4539|TaS-50, Pkinase|ZOV45L@131567, Pkinase|ZOV45L@1437183, Pkinase|ZOV45L@147369, Pkinase|ZOV45L...
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K06260, K14497, K16225, K16226 | Pathway: 04016, 04075, 04512, 04626 | BRITE: 00001, 01000, 04090
eggNOGGOKEGG
eggNOG-inferred
PaHa11g21510PaHa11g21510.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A443PQL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g21520PaHa11g21520.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A443PQL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g21530PaHa11g21530.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A443PQL4 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|GzN-37!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|IK-10!
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa11g21900PaHa11g21900.1

…584 | GO:1902806 | GO:2000037 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | embryo sac development | megasporogenesis | response to gravity | response to auxin | response to abscisic…

Show annotation evidence
eggNOG
Preferred name: LOC102721183 | Seed ortholog: 337451.A0A443NCC7 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AhC-29
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009553 embryo sac development; GO:0009554 megasporogenesis; GO:0009629 response to gravity; GO:0009733 response to auxin; GO:0009737 response to abscisic acid; GO:0009926 auxin polar transport; GO...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g21910PaHa11g21910.1

…826 | GO:0080022 | GO:1901000 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | response to gibberellin | response to sucrose | leaf morphogenesis | lateral root formation | root system development | sequence-specific DNA binding …

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eggNOG
Preferred name: HOX21 | Seed ortholog: 337451.A0A3S3PL41 | COG: S | eggNOG OG: HALZ@131567|BQ-11, Homeodomain@131567|XU-17, Homeodomain@2759|ACU-20!, Homeodomain@3193|GUH-31, Homeodomain@3398|LcL-35, Homeodomain@35493|BwQ-25
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009739 response to gibberellin; GO:0009744 response to sucrose; GO:0009965 leaf morphogenesis; GO:0010311 lateral root formation; GO:0022622 root system development; GO:0043565 sequence-specific DNA binding; GO:0048364 root development; GO:0048527 lateral...
KEGG
KO: K09338 | Pathway: 04113, 04148, 04927, 04934, 05202 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g22000PaHa11g22000.1

…tion of transcription by RNA polymerase II | rDNA heterochromatin formation | DNA-binding transcription factor activity, RNA polymerase II-specific | RNA polymerase I core promoter sequence-specific DNA binding | ATPase activator activity | blastocyst hatching | embryonic placenta development | mole…

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eggNOG
Preferred name: RLT3 | Seed ortholog: 337451.A0A3S3NRS7 | COG: S | eggNOG OG: DDT@131567|B-2!, DDT@33090|y-7, Homeodomain@131567|ED-11, Homeodomain@2759|Fb-12, WHIM1@131567|C-2, WHIM1@33090|DN-10, WSD@131567|A-1*, WSD@33090|Q-5
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000183 rDNA heterochromatin formation; GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific; GO:0001164 RNA polymerase I core promoter sequence-specific DNA binding; GO:0001671 ATPase activator activity; GO:0001835 blastocyst hatching; GO:0001892 embryonic placenta development; GO:0003674 molecular_function; GO...
KEGG
EC: ec:2.3.1.48 | KO: K09307, K09368, K11655, K11658, K11728, K15224, K15607, K18490, K22768, K24893, K26167 | Pathway: 03082 | BRITE: 00001, 01000, 03000, 03021, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa11g22020PaHa11g22020.1

…301 | GO:0080086 | GO:0140964 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | circadian rhythm | response to cytokinin | response to abscisic acid | response to gibberellin | regulatio…

Show annotation evidence
eggNOG
Preferred name: LOC110806156 | Seed ortholog: 337451.A0A443PQP6 | COG: S | eggNOG OG: TCP@131221|AC-7, TCP@131567|A-1*, TCP@2759|G-3, TCP@3193|ET-12, TCP@3398|Zw-20
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0007623 circadian rhythm; GO:0009735 response to cytokinin; GO:0009737 response to abscisic acid; GO:0009739 response to gibberellin; GO:0010029 regulation of seed germination; GO:0010229 inflorescence...
eggNOGGO
eggNOG-inferred
PaHa11g22060PaHa11g22060.1

…GO:0003700 | GO:0005634 | GO:0009733 | GO:0045770 | GO:0048103 | GO:0048829 | DNA-binding transcription factor activity | nucleus | response to auxin | positive regulation of asymmetric cell division | somatic stem cell division | root cap development

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eggNOG
Preferred name: FEZ | Seed ortholog: 337451.A0A3S4PP91 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@3193|hd-15, NAM@3398|CDh-26, NAM@35493|AE-6, NAM@58023|BJP-23
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009733 response to auxin; GO:0045770 positive regulation of asymmetric cell division; GO:0048103 somatic stem cell division; GO:0048829 root cap development
eggNOGGO
eggNOG-inferred
PaHa11g22110PaHa11g22110.1

…893 | GO:1904278 | GO:2000033 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to cold | response to water deprivation | regulation of abscisic acid-activated signaling pathway…

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eggNOG
Preferred name: MYB306 | Seed ortholog: 337451.A0A443PQR6 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AOS-27, Myb_DNA-binding@1437183|ZMr-55, Myb_DNA-binding@33090|FSl-38, Myb_DNA-binding@3398|USz-51, Myb_DNA-binding@35493|KPp-43
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009787 regulation of abscisic acid-activated signaling pathway; GO:0009789 positive regulation of abscisic acid-activated...
KEGG
KO: K09422 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa11g22130PaHa11g22130.1

… binding | DNA-templated transcriptional start site selection | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | response to water deprivation | response to blue light | response to gibberellin | glucosinolate metabolic process | protein homodimerization activity…

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eggNOG
Preferred name: ZHD11 | Seed ortholog: 337451.A0A443PQQ7 | COG: S | eggNOG OG: ZF-HD_dimer@131567|A-1*, ZF-HD_dimer@35493|Aq-9
GO
GO:0000976 transcription cis-regulatory region binding; GO:0001173 DNA-templated transcriptional start site selection; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009637 response to blue light; GO:0009739 response to gibberellin; GO:0019760 glucosinolate metabolic process; GO:0042803...
eggNOGGO
eggNOG-inferred
PaHa11g22320PaHa11g22320.1

…GO:0003700 | GO:0005515 | GO:0005634 | GO:0009555 | GO:0010152 | GO:0080092 | DNA-binding transcription factor activity | protein binding | nucleus | pollen development | pollen maturation | regulation of pollen tube growth

Show annotation evidence
eggNOG
Preferred name: LOC123094739 | Seed ortholog: 337451.A0A443PT27 | COG: S | eggNOG OG: SRF-TF@131567|A-1*, SRF-TF@1437183|CEp-29, SRF-TF@2759|C-2!, SRF-TF@3398|AOO-23, SRF-TF@58023|ai-19
GO
GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009555 pollen development; GO:0010152 pollen maturation; GO:0080092 regulation of pollen tube growth
KEGG
KO: K04378, K04454, K09260, K09261, K09262, K09264, K09265, K12412, K19807, K19808, K27808 | Pathway: 04010, 04011, 04013, 04022, 04111, 04371, 04921, 04928, 05166, 05202, 05203, 05418 | BRITE: 00001, 03000, 03021, 04131
eggNOGGOKEGG
eggNOG-inferred
PaHa12g00090PaHa12g00090.1

…O:0051302 | GO:0051446 | GO:0051726 | GO:0070176 | GO:0140612 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytoplasm | positive regulation of cell population proliferation | response to auxin | trichome morphogenesis | programmed cell death | positive regul…

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eggNOG
Preferred name: E2FB | Seed ortholog: 337451.A0A443Q243 | COG: S | eggNOG OG: E2F_CC-MB@131567|A-1*, E2F_CC-MB@2759|B-2, E2F_CC-MB@3398|IS-15, E2F_TDP@131567|Af-9, E2F_TDP@3193|bj-27
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0008284 positive regulation of cell population proliferation; GO:0009733 response to auxin; GO:0010090 trichome morphogenesis; GO:0012501 programmed cell death; GO:0045893 positive regulation of DNA-templated transcription; GO:0051302 regulation of cell division; GO...
KEGG
KO: K06620 | Pathway: 01522, 03083, 04110, 04137, 04218, 04350, 04934, 05160, 05161, 05163, 05165, 05166, 05167, 05169, 05200, 05206, 05207, 05212, 05214, 05215, 05218, 05219, 05220, 05222, 05223, 05224, 05225, 05226 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa12g00840PaHa12g00840.1

…516 | GO:0005634 | GO:0019760 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | calmodulin binding | nucleus | glucosinolate metabolic process

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eggNOG
Preferred name: WRKY21 | Seed ortholog: 337451.A0A3S3QTG6 | COG: S | eggNOG OG: Plant_zn_clust@131567|A-1*, Plant_zn_clust@3193|I-4, Plant_zn_clust@3398|By-10, WRKY@131567|A-1*, WRKY@2759|CB-10, WRKY@3193|AGq-23, WRKY@33090|Ic-14, WRKY@3398|AOc-24
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005516 calmodulin binding; GO:0005634 nucleus; GO:0019760 glucosinolate metabolic process
KEGG
KO: K13425 | Pathway: 04016, 04626 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa12g00860PaHa12g00860.1

…634 | GO:0006355 | GO:0140728 | transcription cis-regulatory region binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | GC-box binding

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eggNOG
Preferred name: BHLH92 | Seed ortholog: 337451.A0A3S3NKE4 | COG: S | eggNOG OG: HLH@131567|Zg-14!, HLH@3193|BFY-21, HLH@33090|AAF-17, HLH@3398|CEE-24, HLH@35493|AbE-19
GO
GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0140728 GC-box binding
eggNOGGO
eggNOG-inferred
PaHa12g00930PaHa12g00930.1

… GO:0008623 | GO:0009408 | GO:0009414 | GO:0043596 | GO:0140672 | chromatin | DNA-binding transcription factor activity | protein binding | cellular_component | nucleus | cytosol | regulation of DNA-templated transcription | epsilon DNA polymerase complex | CHRAC | response to heat | response to wat…

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eggNOG
Preferred name: NFYB3 | Seed ortholog: 337451.A0A3S3RB14 | COG: COG2036 | eggNOG OG: CBFD_NFYB_HMF@131567|BS-10, CBFD_NFYB_HMF@2759|ID-16
GO
GO:0000785 chromatin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0008622 epsilon DNA polymerase complex; GO:0008623 CHRAC; GO:0009408 response to heat; GO:0009414 response to water deprivation; GO:0043596 nuclear replication fork; GO:0140672 ATAC...
KEGG
EC: ec:2.7.7.7 | KO: K02326 | Pathway: 03030, 03082, 03410, 03420 | BRITE: 00001, 01000, 03032, 03036, 03400
eggNOGGOKEGG
eggNOG-inferred
PaHa12g00960PaHa12g00960.1

…binding | cis-regulatory region sequence-specific DNA binding | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to cold | response to water deprivation | response to salt stress | response to abscisic acid | a…

Show annotation evidence
eggNOG
Preferred name: ABI5 | Seed ortholog: 337451.A0A3S4Q0E9 | COG: S | eggNOG OG: bZIP_1@131567|BO-8!, bZIP_1@3193|AIn-24, bZIP_1@33090|aa-18, bZIP_1@3398|Atv-27, bZIP_1@35493|AAI-23
GO
GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009409 response to cold; GO:0009414 response to water deprivation; GO:0009651 response to salt stress; GO:0009737...
KEGG
KO: K14432 | Pathway: 04075 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa12g01190PaHa12g01190.1

… transcription repressor activity, RNA polymerase II-specific | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | nucleoplasm | cytoplasm | regulation of DNA-templated transcription | regulation of transcription by RNA polymerase II | specification of segmental id…

Show annotation evidence
eggNOG
Preferred name: WIP3 | Seed ortholog: 337451.A0A443Q2C0 | COG: S | eggNOG OG: zf-C2H2@131567|qO-18, zf-C2H2@1437183|IJz-30, zf-C2H2@2759|AFG-19
GO
GO:0000122 negative regulation of transcription by RNA polymerase II; GO:0000976 transcription cis-regulatory region binding; GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0006355 regulation of DNA...
KEGG
KO: K09191, K09228, K09236, K22535, K24853, K25869, K25870, K25871 | Pathway: 04391, 05168 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa12g01930PaHa12g01930.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: RGA3 | Seed ortholog: 337451.A0A443N271 | COG: S | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@1437183|IZq-39!, NB-ARC@3193|Cnn-30, NB-ARC@35493|Aho-23, Rx_N@131567|O-4, Rx_N@1437183|Sv-12
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K19613 | Pathway: 04016, 04075, 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa12g02050PaHa12g02050.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC104592198 | Seed ortholog: 337451.A0A3S3N7X7 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@3398|Dli-32, NB-ARC@35493|Ary-24, NB-ARC@58023|BfR-27
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13457 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa12g02060PaHa12g02060.1

…mycetes | innate immune response-activating signaling pathway | DNA binding | DNA-binding transcription factor activity | mRNA binding | protein binding | cellular_component | nucleus | cytoplasm | mitochondrion | endoplasmic reticulum membrane | cytosol | plasma membrane | defense response | respon…

Show annotation evidence
eggNOG
Preferred name: LOC104592198 | Seed ortholog: 337451.A0A3S3N7X7 | COG: COG5635 | eggNOG OG: NB-ARC@131567|AC-6, NB-ARC@3398|Dli-32, NB-ARC@35493|Ary-24, NB-ARC@58023|BfR-27
GO
GO:0000139 Golgi membrane; GO:0000166 nucleotide binding; GO:0000325 plant-type vacuole; GO:0002229 defense response to oomycetes; GO:0002239 response to oomycetes; GO:0002758 innate immune response-activating signaling pathway; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO...
KEGG
EC: ec:3.1.3.16 | KO: K13457 | Pathway: 04626 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa12g02390PaHa12g02390.1

…O:0009737 | GO:0009793 | GO:0031930 | GO:0043565 | GO:0045893 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | cytosol | regulation of DNA-templated transcription | plastid organization | response to auxin | response to abscisic acid | embryo development ending…

Show annotation evidence
eggNOG
Preferred name: VP1 | Seed ortholog: 337451.A0A443N759 | COG: S | eggNOG OG: B3@131567|A-1*, B3@33090|AIM-20, B3@3398|CTd-30, B3@58023|Bmr-27
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0009657 plastid organization; GO:0009733 response to auxin; GO:0009737 response to abscisic acid; GO:0009793 embryo development ending in seed dormancy; GO:0031930 mitochondria-nucleus signaling pathway; GO:0043565...
KEGG
KO: K09287 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa12g02740PaHa12g02740.1

PaHa12g02740 | PaHa12g02740.1 | PP1 | 4432.A0A1U8AAN4 | Metallophos@131567|AWl-19 | Metallophos@1437183|nCR-47 | Metallophos@2759|RnV-36! | Metallophos@3398|cTJ-42 | STPPase_N@131567|A-1* | STPPase_N@1437183|eZ-29 | STPPase_N@2759|Aw-12 | STPPase_N@33090|Oh...

Show annotation evidence
eggNOG
Preferred name: PP1 | Seed ortholog: 4432.A0A1U8AAN4 | COG: S | eggNOG OG: Metallophos@131567|AWl-19, Metallophos@1437183|nCR-47, Metallophos@2759|RnV-36!, Metallophos@3398|cTJ-42, STPPase_N@131567|A-1*, STPPase_N@1437183|eZ-29, STPPase_N@2759|Aw-12, STPPase_N@33090|Oh-22
GO
GO:0000022 mitotic spindle elongation; GO:0000070 mitotic sister chromatid segregation; GO:0000076 DNA replication checkpoint signaling; GO:0000077 DNA damage checkpoint signaling; GO:0000131 incipient cellular bud site; GO:0000164 protein phosphatase type 1 complex; GO:0000165 MAPK cascade; GO:0000278 mitotic cell cycle; GO:0000282 cellular bud site selection; GO:0000723 telomere maintenance; GO:0000776...
KEGG
EC: ec:3.1.3.16 | KO: K06269 | Pathway: 03015 | BRITE: 00001, 01000, 01009, 03019, 03021, 03041
eggNOGGOKEGG
eggNOG-inferred
PaHa12g03050PaHa12g03050.1

…gulatory region sequence-specific DNA binding | double-stranded DNA binding | DNA-binding transcription factor activity | nucleus | regulation of DNA-templated transcription | pollen development | anatomical structure morphogenesis | auxin-activated signaling pathway | pollen wall assembly | adventi…

Show annotation evidence
eggNOG
Preferred name: ARF17 | Seed ortholog: 337451.A0A443Q2J5 | COG: S | eggNOG OG: Auxin_resp@131221|AX-8, Auxin_resp@131567|A-1*, Auxin_resp@2759|O-4, Auxin_resp@3398|CO-11, B3@131221|AHw-20, B3@131567|A-1*, B3@3193|BOq-25, B3@33090|Id-12
GO
GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003690 double-stranded DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0009653 anatomical structure morphogenesis; GO:0009734 auxin-activated signaling pathway; GO:0010208 pollen wall assembly; GO:0048830 adventitious root...
KEGG
KO: K14486 | Pathway: 04075 | BRITE: 00001
eggNOGGOKEGG
eggNOG-inferred
PaHa12g03240PaHa12g03240.1

…O:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | GO:0009408 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to heat

Show annotation evidence
eggNOG
Preferred name: HSFA3 | Seed ortholog: 337451.A0A3S3R997 | COG: S | eggNOG OG: HSF_DNA-bind@131567|Dp-10, HSF_DNA-bind@3193|AWe-23, HSF_DNA-bind@33090|fZ-18, HSF_DNA-bind@3398|AhZ-24, HSF_DNA-bind@35493|uY-20
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat
KEGG
KO: K09419 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa12g03250PaHa12g03250.1

…O:0003700 | GO:0005515 | GO:0005634 | GO:0006355 | GO:0009408 | DNA binding | DNA-binding transcription factor activity | protein binding | nucleus | regulation of DNA-templated transcription | response to heat

Show annotation evidence
eggNOG
Preferred name: HSFA3 | Seed ortholog: 337451.A0A3S3R997 | COG: S | eggNOG OG: HSF_DNA-bind@131567|Dp-10, HSF_DNA-bind@3193|AWe-23, HSF_DNA-bind@33090|fZ-18, HSF_DNA-bind@3398|AhZ-24, HSF_DNA-bind@35493|uY-20
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009408 response to heat
KEGG
KO: K09419 | BRITE: 00001, 03000
eggNOGGOKEGG
eggNOG-inferred
PaHa12g03260PaHa12g03260.1

PaHa12g03260 | PaHa12g03260.1 | LOC104612494 | 337451.A0A443Q2I3 | CID@131567|A-1* | CID@2759|AD-6 | CID@3193|qa-21 | S | K14400 | 03015 | 00001 | 03019 | 03021 | CID_81_189 | GO:0000785 | GO:0000993 | GO:0003674 | GO:0003723 | GO:0003729 | GO:0005515 | GO...

Show annotation evidence
eggNOG
Preferred name: LOC104612494 | Seed ortholog: 337451.A0A443Q2I3 | COG: S | eggNOG OG: CID@131567|A-1*, CID@2759|AD-6, CID@3193|qa-21
GO
GO:0000785 chromatin; GO:0000993 RNA polymerase II complex binding; GO:0003674 molecular_function; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005739 mitochondrion; GO:0005829 cytosol; GO:0005848 mRNA cleavage stimulating factor complex; GO:0005849 mRNA cleavage factor complex; GO:0006369 termination of...
KEGG
KO: K14400 | Pathway: 03015 | BRITE: 00001, 03019, 03021
eggNOGGOKEGG
eggNOG-inferred
PaHa12g03520PaHa12g03520.1

…O:0043565 | GO:0045814 | GO:0048589 | GO:0090333 | GO:0099402 | DNA binding | DNA-binding transcription factor activity | nucleus | response to water deprivation | response to abscisic acid | abscisic acid-activated signaling pathway | chromatin DNA binding | histone H3K4 demethylase activity | hist…

Show annotation evidence
eggNOG
Preferred name: LOC100819576 | Seed ortholog: 4432.A0A1U8A1C0 | COG: S | eggNOG OG: ARID@131567|A-1*, ARID@2759|CS-9, JmjC@131567|Ae-7, JmjC@2759|Xi-17, JmjN@131567|A-1*, JmjN@2759|Bi-10, PHD@131567|A-1*, PHD@2759|Vu-13, PLU-1@131567|A-1, zf-C5HC2@131567|A-1*, zf-C5HC2@2759|C-2!
GO
GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0009414 response to water deprivation; GO:0009737 response to abscisic acid; GO:0009738 abscisic acid-activated signaling pathway; GO:0031490 chromatin DNA binding; GO:0032453 histone H3K4 demethylase activity; GO:0034647 histone H3K4me/H3K4me2/H3K4me3 demethylase activity; GO:0043565 sequence-specific DNA binding;...
KEGG
EC: ec:1.14.11.67 | KO: K11446 | Pathway: 03022, 03082, 03083, 04550 | BRITE: 00001, 01000, 01009, 03036
eggNOGGOKEGG
eggNOG-inferred
PaHa12g03710PaHa12g03710.1

PaHa12g03710 | PaHa12g03710.1 | LOC104216532 | 3885.V7BJ56 | DUF4283@131567|A-1* | DUF4283@2231393|pW-17 | DUF4283@3193|B-2 | RRM_1@131567|Gk-13 | RRM_1@2759|rq-21! | S | ec:2.1.1.354 | ec:2.3.1.48 | ec:2.3.2.27 | ec:2.7.7.19 | ec:2.7.7.52 | K12891 | 03040 ...

Show annotation evidence
eggNOG
Preferred name: LOC104216532 | Seed ortholog: 3885.V7BJ56 | COG: S | eggNOG OG: DUF4283@131567|A-1*, DUF4283@2231393|pW-17, DUF4283@3193|B-2, RRM_1@131567|Gk-13, RRM_1@2759|rq-21!
GO
GO:0000398 mRNA splicing, via spliceosome; GO:0000785 chromatin; GO:0003677 DNA binding; GO:0003690 double-stranded DNA binding; GO:0003723 RNA binding; GO:0003729 mRNA binding; GO:0003730 mRNA 3'-UTR binding; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005628 prospore membrane; GO:0005634 nucleus; GO:0005654 nucleoplasm; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005847...
KEGG
EC: ec:2.1.1.354, ec:2.3.1.48, ec:2.3.2.27, ec:2.7.7.19, ec:2.7.7.52 | KO: K12891 | Pathway: 03040 | BRITE: 00001, 03041
eggNOGGOKEGG
eggNOG-inferred
PaHa12g04210PaHa12g04210.1

…0008150 | condensed chromosome | condensed nuclear chromosome | DNA binding | DNA-binding transcription factor activity | nucleus | biological_process

Show annotation evidence
eggNOG
Preferred name: HMGB13 | Seed ortholog: 337451.A0A3S3N1A8 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Of-14
GO
GO:0000793 condensed chromosome; GO:0000794 condensed nuclear chromosome; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0008150 biological_process
KEGG
EC: ec:2.1.1.354 | KO: K09273 | Pathway: 00310, 01100 | BRITE: 00001, 03000, 03021
eggNOGGOKEGG
eggNOG-inferred

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