Hass · gene

PaHa04g06490

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

2,190
bp
4:15,397,976–15,413,395
genomic location
Record overview

Feature identity

Identifier
PaHa04g06490
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
2,190 bp
Genomic location
4:15,397,976–15,413,395
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: MCM5 | Seed ortholog: 337451.A0A443PJY9 | COG: COG1241 | eggNOG OG: MCM@131567|Ap-13, MCM_N@131567|m-8, MCM_N@2759|AS-10, MCM_OB@131567|O-4, MCM_OB@2759|t-6, MCM_lid@131567|BN-9, MCM_lid@2759|CS-10
Gene Ontology
GO:0000278 mitotic cell cycle; GO:0000347 THO complex; GO:0000712 resolution of meiotic recombination intermediates; GO:0000727 double-strand break repair via break-induced replication; GO:0000785 chromatin; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0006260 DNA replication; GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication; GO:0006270 DNA replication initiation; GO:0006271 DNA strand elongation involved in DNA replication; GO:0006279 premeiotic DNA replication; GO:0006368 transcription elongation by RNA polymerase II; GO:0008543 fibroblast growth factor receptor signaling pathway; GO:0021534 cell proliferation in hindbrain; GO:0021535 cell migration in hindbrain; GO:0030174 regulation of DNA-templated DNA replication initiation; GO:0030261 chromosome condensation; GO:0031507 heterochromatin formation; GO:0031509 subtelomeric heterochromatin formation; GO:0033260 nuclear DNA replication; GO:0042023 DNA endoreduplication; GO:0043009 chordate embryonic development; GO:0043066 negative regulation of apoptotic process; GO:0044786 cell cycle DNA replication; GO:0051321 meiotic cell cycle; GO:1902975 mitotic DNA replication initiation
KEGG
EC: ec:5.6.2.3 | KO: K02209 | Pathway: 03030 | BRITE: 00001, 01000, 03032, 03036
Biological context

Connected feature records

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