Feature identity
- Identifier
- PaHa03g06580.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,140 bp
- Genomic location
- 3:12,950,536–12,951,986
- Strand
- +
Hass · mRNA
PaHa03g06580.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,140
- bp
- 3:12,950,536–12,951,986
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa03g06580
- eggNOG
- Preferred name: LOC104611190 | Seed ortholog: 337451.A0A443NB53 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@1437183|Baz-24, NAM@3193|Aav-20, NAM@35493|AE-6
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0140677 molecular function activator activity; GO:1900057 positive regulation of leaf senescence; GO:1903648 positive regulation of chlorophyll catabolic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa03g06580.1-protein
derives_frommRNAPaHa03g06580.1
mRNAPaHa03g06580.1
part_ofgenePaHa03g06580
CDS
part_ofPaHa03g06580.1-CDS-3-1787993825:12950536..12950722mRNAPaHa03g06580.1
CDS
part_ofPaHa03g06580.1-CDS-3-1787993825:12950860..12951140mRNAPaHa03g06580.1
CDS
part_ofPaHa03g06580.1-CDS-3-1787993825:12951315..12951986mRNAPaHa03g06580.1
exon
part_ofPaHa03g06580.1-exon-3-1787993825:12950536..12950722mRNAPaHa03g06580.1
exon
part_ofPaHa03g06580.1-exon-3-1787993825:12950860..12951140mRNAPaHa03g06580.1
exon
part_ofPaHa03g06580.1-exon-3-1787993825:12951315..12951986mRNAPaHa03g06580.1
