Feature identity
- Identifier
- PaHa01g08890.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,656 bp
- Genomic location
- 1:12,867,537–12,870,233
- Strand
- −
Hass · mRNA
PaHa01g08890.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,656
- bp
- 1:12,867,537–12,870,233
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g08890
- eggNOG
- Preferred name: Bp10 | Seed ortholog: 52838.A0A4S8JZQ9 | COG: COG2132 | eggNOG OG: Cu-oxidase@131567|A-1, Cu-oxidase@2759|v-6, Cu-oxidase@3193|ALV-18, Cu-oxidase@3398|Auj-20, Cu-oxidase@35493|Kt-12, Cu-oxidase@4640|Icg-33, Cu-oxidase_2@1437197|gX-18, Cu-oxidase_2@2759|B-2!, Cu-oxidase_2@3193|EO-11, Cu-oxidase_2@3398|LT-14, Cu-oxidase_2@4640|BQB-24, Cu-oxidase_3@131567|C-2!, Cu-oxidase_3@1437183|AYp-21, Cu-oxidase_3@3193|Wt-16, Cu-oxidase_3@3398|lh-18, Cu-oxidase_3@4640|GHi-30
- Gene Ontology
- GO:0004097 catechol oxidase activity; GO:0004322 ferroxidase activity; GO:0004503 tyrosinase activity; GO:0005576 extracellular region; GO:0008150 biological_process; GO:0008447 L-ascorbate oxidase activity; GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
- KEGG
- EC: ec:1.10.3.3 | KO: K00423 | Pathway: 00053, 01100 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g08890.1-protein
derives_frommRNAPaHa01g08890.1
mRNAPaHa01g08890.1
part_ofgenePaHa01g08890
CDS
part_ofPaHa01g08890.1-CDS-1-1787993825:12867537..12867840mRNAPaHa01g08890.1
CDS
part_ofPaHa01g08890.1-CDS-1-1787993825:12868285..12869388mRNAPaHa01g08890.1
CDS
part_ofPaHa01g08890.1-CDS-1-1787993825:12869986..12870233mRNAPaHa01g08890.1
exon
part_ofPaHa01g08890.1-exon-1-1787993825:12867537..12867840mRNAPaHa01g08890.1
exon
part_ofPaHa01g08890.1-exon-1-1787993825:12868285..12869388mRNAPaHa01g08890.1
exon
part_ofPaHa01g08890.1-exon-1-1787993825:12869986..12870233mRNAPaHa01g08890.1
