Feature identity
- Identifier
- PaHa02g43970.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 963 bp
- Genomic location
- 2:101,860,615–101,863,641
- Strand
- +
Hass · mRNA
PaHa02g43970.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 963
- bp
- 2:101,860,615–101,863,641
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g43970
- eggNOG
- Preferred name: COR2 | Seed ortholog: 337451.A0A3S3M8H9 | COG: S | eggNOG OG: Aldo_ket_red@131567|CbX-22, Aldo_ket_red@1437183|gzq-42!, Aldo_ket_red@3398|efs-41
- Gene Ontology
- GO:0005829 cytosol; GO:0016491 oxidoreductase activity; GO:0019290 siderophore biosynthetic process; GO:0033707 3''-deamino-3''-oxonicotianamine reductase activity; GO:0034224 cellular response to zinc ion starvation; GO:0047036 codeinone reductase (NADPH) activity; GO:1990641 response to iron ion starvation
- KEGG
- EC: ec:1.1.1.247, ec:1.1.1.285 | KO: K08243, K13394, K22374 | Pathway: 00941, 00950, 00999, 01100, 01110 | Module: M00940, M00944, M00953 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g43970.1-protein
derives_frommRNAPaHa02g43970.1
mRNAPaHa02g43970.1
part_ofgenePaHa02g43970
CDS
part_ofPaHa02g43970.1-CDS-2-1787993825:101860615..101860928mRNAPaHa02g43970.1
CDS
part_ofPaHa02g43970.1-CDS-2-1787993825:101862000..101862243mRNAPaHa02g43970.1
CDS
part_ofPaHa02g43970.1-CDS-2-1787993825:101862380..101862559mRNAPaHa02g43970.1
CDS
part_ofPaHa02g43970.1-CDS-2-1787993825:101863417..101863641mRNAPaHa02g43970.1
exon
part_ofPaHa02g43970.1-exon-2-1787993825:101860615..101860928mRNAPaHa02g43970.1
exon
part_ofPaHa02g43970.1-exon-2-1787993825:101862000..101862243mRNAPaHa02g43970.1
exon
part_ofPaHa02g43970.1-exon-2-1787993825:101862380..101862559mRNAPaHa02g43970.1
exon
part_ofPaHa02g43970.1-exon-2-1787993825:101863417..101863641mRNAPaHa02g43970.1
