Feature identity
- Identifier
- PaHa02g43370.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,143 bp
- Genomic location
- 2:101,027,091–101,037,272
- Strand
- +
Hass · mRNA
PaHa02g43370.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,143
- bp
- 2:101,027,091–101,037,272
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g43370
- eggNOG
- Preferred name: LOC543178 | Seed ortholog: 337451.A0A3S3PWZ2 | COG: S | eggNOG OG: MFMR@131221|G-3, MFMR@131567|A-1*, MFMR@3398|X-5, MFMR_assoc@131567|A-1*, MFMR_assoc@3398|L-4, bZIP_1@131567|Ac-7, bZIP_1@3398|wD-22
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0042802 identical protein binding; GO:0043565 sequence-specific DNA binding; GO:0045893 positive regulation of DNA-templated transcription
- KEGG
- KO: K09060 | Pathway: 04011 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g43370.1-protein
derives_frommRNAPaHa02g43370.1
mRNAPaHa02g43370.1
part_ofgenePaHa02g43370
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101027091..101027150mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101027268..101027324mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101027414..101027518mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101029194..101029277mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101029534..101029590mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101031219..101031376mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101031456..101031510mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101032617..101032656mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101032785..101033068mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101033141..101033218mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101036750..101036875mRNAPaHa02g43370.1
CDS
part_ofPaHa02g43370.1-CDS-2-1787993825:101037234..101037272mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101027091..101027150mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101027268..101027324mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101027414..101027518mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101029194..101029277mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101029534..101029590mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101031219..101031376mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101031456..101031510mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101032617..101032656mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101032785..101033068mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101033141..101033218mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101036750..101036875mRNAPaHa02g43370.1
exon
part_ofPaHa02g43370.1-exon-2-1787993825:101037234..101037272mRNAPaHa02g43370.1
