Hass · gene

PaHa02g03680

A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.

270
bp
2:6,258,140–6,258,409
genomic location
Record overview

Feature identity

Identifier
PaHa02g03680
Feature type
gene
Genome collection
Hass
Organism
Persea americana-Hass
Sequence length
270 bp
Genomic location
2:6,258,140–6,258,409
Strand
+
Open original Tripal record
Computational annotation

Functional evidence

These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.

eggNOG
Preferred name: SALR | Seed ortholog: 337451.A0A443N0X1 | COG: S | eggNOG OG: adh_short@131567|ATN-24, adh_short@3193|Gdl-35, adh_short@3398|AHuc-49!
Gene Ontology
GO:0000253 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity; GO:0004090 carbonyl reductase (NADPH) activity; GO:0005515 protein binding; GO:0005654 nucleoplasm; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005902 microvillus; GO:0006706 steroid catabolic process; GO:0006805 xenobiotic metabolic process; GO:0008106 alcohol dehydrogenase (NADP+) activity; GO:0008211 glucocorticoid metabolic process; GO:0008753 NADPH dehydrogenase (quinone) activity; GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; GO:0030855 epithelial cell differentiation; GO:0032355 response to estradiol; GO:0032570 response to progesterone; GO:0042373 vitamin K metabolic process; GO:0042376 phylloquinone catabolic process; GO:0042446 hormone biosynthetic process; GO:0046457 prostanoid biosynthetic process; GO:0047020 15-hydroxyprostaglandin-D dehydrogenase (NADP+) activity; GO:0047021 15-hydroxyprostaglandin dehydrogenase (NADP+) activity; GO:0047044 androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity; GO:0050221 prostaglandin E2 9-reductase activity; GO:0050890 cognition; GO:0070062 extracellular exosome; GO:0070402 NADPH binding; GO:0160163 S-nitrosoglutathione reductase (NADPH) activity; GO:1903561 extracellular vesicle; GO:1905344 prostaglandin catabolic process; GO:2000379 positive regulation of reactive oxygen species metabolic process
KEGG
EC: ec:1.1.1.208, ec:1.1.1.248 | KO: K13392, K15095 | Pathway: 00902, 00950, 01100, 01110 | Module: M00944 | BRITE: 00001, 01000
Biological context

Connected feature records

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