Feature identity
- Identifier
- PaHa02g42450.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 4,089 bp
- Genomic location
- 2:99,772,369–99,804,500
- Strand
- +
Hass · mRNA
PaHa02g42450.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,089
- bp
- 2:99,772,369–99,804,500
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g42450
- eggNOG
- Preferred name: TAF2 | Seed ortholog: 337451.A0A3S3M8A4 | COG: COG0308 | eggNOG OG: Peptidase_M1@131567|Ab-7
- Gene Ontology
- GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding; GO:0005634 nucleus; GO:0006352 DNA-templated transcription initiation; GO:0006366 transcription by RNA polymerase II; GO:0006367 transcription initiation at RNA polymerase II promoter; GO:0009506 plasmodesma; GO:0009792 embryo development ending in birth or egg hatching; GO:0016251 RNA polymerase II general transcription initiation factor activity; GO:0017025 TBP-class protein binding; GO:0051123 RNA polymerase II preinitiation complex assembly; GO:0140296 general transcription initiation factor binding
- KEGG
- KO: K03128 | Pathway: 03022 | BRITE: 00001, 01002, 03021, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g42450.1-protein
derives_frommRNAPaHa02g42450.1
mRNAPaHa02g42450.1
part_ofgenePaHa02g42450
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99772369..99772487mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99773962..99774334mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99774466..99774611mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99774736..99774802mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99779775..99779974mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99780155..99780308mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99781016..99781100mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99781208..99781299mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99787016..99787141mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99787246..99787299mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99788659..99788727mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99789756..99789853mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99789963..99790310mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99790401..99790488mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99791684..99791809mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99791904..99791960mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99795540..99795619mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99795969..99796011mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99799679..99799765mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99801239..99801328mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99801866..99801924mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99802022..99802112mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99802186..99802354mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99802435..99802618mRNAPaHa02g42450.1
CDS
part_ofPaHa02g42450.1-CDS-2-1787993825:99803417..99804500mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99772369..99772487mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99773962..99774334mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99774466..99774611mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99774736..99774802mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99779775..99779974mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99780155..99780308mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99781016..99781100mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99781208..99781299mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99787016..99787141mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99787246..99787299mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99788659..99788727mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99789756..99789853mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99789963..99790310mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99790401..99790488mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99791684..99791809mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99791904..99791960mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99795540..99795619mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99795969..99796011mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99799679..99799765mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99801239..99801328mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99801866..99801924mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99802022..99802112mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99802186..99802354mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99802435..99802618mRNAPaHa02g42450.1
exon
part_ofPaHa02g42450.1-exon-2-1787993825:99803417..99804500mRNAPaHa02g42450.1
