Feature identity
- Identifier
- PaHa02g42260.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,023 bp
- Genomic location
- 2:99,575,196–99,577,423
- Strand
- +
Hass · mRNA
PaHa02g42260.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,023
- bp
- 2:99,575,196–99,577,423
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g42260
- eggNOG
- Preferred name: BHLH30 | Seed ortholog: 337451.A0A443N907 | COG: S | eggNOG OG: HLH@131567|OW-12, HLH@35493|Abo-19, HLH@58023|BHP-21
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009718 anthocyanin-containing compound biosynthetic process; GO:0016036 cellular response to phosphate starvation; GO:0048364 root development; GO:0080147 root hair cell development
- KEGG
- KO: K09092, K22495 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g42260.1-protein
derives_frommRNAPaHa02g42260.1
mRNAPaHa02g42260.1
part_ofgenePaHa02g42260
CDS
part_ofPaHa02g42260.1-CDS-2-1787993825:99575196..99575768mRNAPaHa02g42260.1
CDS
part_ofPaHa02g42260.1-CDS-2-1787993825:99576974..99577423mRNAPaHa02g42260.1
exon
part_ofPaHa02g42260.1-exon-2-1787993825:99575196..99575768mRNAPaHa02g42260.1
exon
part_ofPaHa02g42260.1-exon-2-1787993825:99576974..99577423mRNAPaHa02g42260.1
