Feature identity
- Identifier
- PaHa02g41930.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,329 bp
- Genomic location
- 2:99,220,028–99,226,513
- Strand
- −
Hass · mRNA
PaHa02g41930.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,329
- bp
- 2:99,220,028–99,226,513
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g41930
- eggNOG
- Preferred name: PAN | Seed ortholog: 337451.A0A3S4NBH1 | COG: S | eggNOG OG: DOG1@131567|A-1*, DOG1@2759|DM-10, DOG1@3398|MT-14, bZIP_1@131567|B-2, bZIP_1@35493|gW-20
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009909 regulation of flower development
- KEGG
- KO: K14431 | Pathway: 04075 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g41930.1-protein
derives_frommRNAPaHa02g41930.1
mRNAPaHa02g41930.1
part_ofgenePaHa02g41930
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99220028..99220174mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99220254..99220499mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99220585..99220856mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99222018..99222075mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99222209..99222286mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99223039..99223098mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99223209..99223286mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99224930..99225127mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99225914..99225987mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99226198..99226274mRNAPaHa02g41930.1
CDS
part_ofPaHa02g41930.1-CDS-2-1787993825:99226473..99226513mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99220028..99220174mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99220254..99220499mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99220585..99220856mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99222018..99222075mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99222209..99222286mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99223039..99223098mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99223209..99223286mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99224930..99225127mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99225914..99225987mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99226198..99226274mRNAPaHa02g41930.1
exon
part_ofPaHa02g41930.1-exon-2-1787993825:99226473..99226513mRNAPaHa02g41930.1
