Feature identity
- Identifier
- PaHa02g41420.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,194 bp
- Genomic location
- 2:98,088,225–98,089,665
- Strand
- −
Hass · mRNA
PaHa02g41420.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,194
- bp
- 2:98,088,225–98,089,665
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g41420
- eggNOG
- Preferred name: LOC104611190 | Seed ortholog: 337451.A0A3S3M816 | COG: S | eggNOG OG: NAM@131567|A-1*, NAM@1437183|Baz-24, NAM@3193|Aav-20, NAM@35493|AE-6
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005509 calcium ion binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0140677 molecular function activator activity; GO:1900057 positive regulation of leaf senescence; GO:1903648 positive regulation of chlorophyll catabolic process
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g41420.1-protein
derives_frommRNAPaHa02g41420.1
mRNAPaHa02g41420.1
part_ofgenePaHa02g41420
CDS
part_ofPaHa02g41420.1-CDS-2-1787993825:98088225..98088950mRNAPaHa02g41420.1
CDS
part_ofPaHa02g41420.1-CDS-2-1787993825:98089098..98089378mRNAPaHa02g41420.1
CDS
part_ofPaHa02g41420.1-CDS-2-1787993825:98089479..98089665mRNAPaHa02g41420.1
exon
part_ofPaHa02g41420.1-exon-2-1787993825:98088225..98088950mRNAPaHa02g41420.1
exon
part_ofPaHa02g41420.1-exon-2-1787993825:98089098..98089378mRNAPaHa02g41420.1
exon
part_ofPaHa02g41420.1-exon-2-1787993825:98089479..98089665mRNAPaHa02g41420.1
