Feature identity
- Identifier
- PaHa02g41400.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 822 bp
- Genomic location
- 2:98,073,458–98,075,976
- Strand
- −
Hass · mRNA
PaHa02g41400.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 822
- bp
- 2:98,073,458–98,075,976
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g41400
- eggNOG
- Preferred name: LOC110779585 | Seed ortholog: 337451.A0A3S3MEH3 | COG: S | eggNOG OG: Thioredoxin@131567|WD-15, Thioredoxin@3398|OXQ-35, Thioredoxin@35493|LZH-33
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0006979 response to oxidative stress; GO:0009414 response to water deprivation; GO:0009507 chloroplast; GO:0009570 chloroplast stroma; GO:0010286 heat acclimation; GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0031969 chloroplast membrane; GO:0042742 defense response to bacterium; GO:0045454 cell redox homeostasis
- KEGG
- EC: ec:3.1.6.13 | KO: K01136, K03671 | Pathway: 00531, 01100, 04621, 05132 | Module: M00076, M00078 | BRITE: 00001, 01000, 03110
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g41400.1-protein
derives_frommRNAPaHa02g41400.1
mRNAPaHa02g41400.1
part_ofgenePaHa02g41400
CDS
part_ofPaHa02g41400.1-CDS-2-1787993825:98073458..98073715mRNAPaHa02g41400.1
CDS
part_ofPaHa02g41400.1-CDS-2-1787993825:98074100..98074264mRNAPaHa02g41400.1
CDS
part_ofPaHa02g41400.1-CDS-2-1787993825:98074360..98074536mRNAPaHa02g41400.1
CDS
part_ofPaHa02g41400.1-CDS-2-1787993825:98075755..98075976mRNAPaHa02g41400.1
exon
part_ofPaHa02g41400.1-exon-2-1787993825:98073458..98073715mRNAPaHa02g41400.1
exon
part_ofPaHa02g41400.1-exon-2-1787993825:98074100..98074264mRNAPaHa02g41400.1
exon
part_ofPaHa02g41400.1-exon-2-1787993825:98074360..98074536mRNAPaHa02g41400.1
exon
part_ofPaHa02g41400.1-exon-2-1787993825:98075755..98075976mRNAPaHa02g41400.1
