Feature identity
- Identifier
- PaHa02g40660.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,185 bp
- Genomic location
- 2:96,934,292–96,938,065
- Strand
- −
Hass · mRNA
PaHa02g40660.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,185
- bp
- 2:96,934,292–96,938,065
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g40660
- eggNOG
- Preferred name: LOC104593481 | Seed ortholog: 337451.A0A443N8P9 | COG: S | eggNOG OG: AP2@131567|Eo-12, AP2@3193|Apw-24, AP2@33090|Xs-18, AP2@58023|Bfl-26
- Gene Ontology
- GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006109 regulation of carbohydrate metabolic process; GO:0006110 regulation of glycolytic process; GO:0006629 lipid metabolic process; GO:0008610 lipid biosynthetic process; GO:0009744 response to sucrose; GO:0019432 triglyceride biosynthetic process; GO:0019900 kinase binding; GO:1901959 positive regulation of cutin biosynthetic process
- KEGG
- KO: K09285 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g40660.1-protein
derives_frommRNAPaHa02g40660.1
mRNAPaHa02g40660.1
part_ofgenePaHa02g40660
CDS
part_ofPaHa02g40660.1-CDS-2-1787993825:96934292..96934887mRNAPaHa02g40660.1
CDS
part_ofPaHa02g40660.1-CDS-2-1787993825:96936843..96936919mRNAPaHa02g40660.1
CDS
part_ofPaHa02g40660.1-CDS-2-1787993825:96936998..96937122mRNAPaHa02g40660.1
CDS
part_ofPaHa02g40660.1-CDS-2-1787993825:96937230..96937318mRNAPaHa02g40660.1
CDS
part_ofPaHa02g40660.1-CDS-2-1787993825:96937516..96937524mRNAPaHa02g40660.1
CDS
part_ofPaHa02g40660.1-CDS-2-1787993825:96937658..96937740mRNAPaHa02g40660.1
CDS
part_ofPaHa02g40660.1-CDS-2-1787993825:96937860..96938065mRNAPaHa02g40660.1
exon
part_ofPaHa02g40660.1-exon-2-1787993825:96934292..96934887mRNAPaHa02g40660.1
exon
part_ofPaHa02g40660.1-exon-2-1787993825:96936843..96936919mRNAPaHa02g40660.1
exon
part_ofPaHa02g40660.1-exon-2-1787993825:96936998..96937122mRNAPaHa02g40660.1
exon
part_ofPaHa02g40660.1-exon-2-1787993825:96937230..96937318mRNAPaHa02g40660.1
exon
part_ofPaHa02g40660.1-exon-2-1787993825:96937516..96937524mRNAPaHa02g40660.1
exon
part_ofPaHa02g40660.1-exon-2-1787993825:96937658..96937740mRNAPaHa02g40660.1
exon
part_ofPaHa02g40660.1-exon-2-1787993825:96937860..96938065mRNAPaHa02g40660.1
