Feature identity
- Identifier
- PaHa02g39140.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,476 bp
- Genomic location
- 2:94,782,210–94,790,524
- Strand
- +
Hass · mRNA
PaHa02g39140.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,476
- bp
- 2:94,782,210–94,790,524
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g39140
- eggNOG
- Preferred name: HMGCL | Seed ortholog: 337451.A0A3S3PXJ2 | COG: COG0119 | eggNOG OG: HMGL-like@131567|GB-14, HMGL-like@58023|Qtu-41
- Gene Ontology
- GO:0001889 liver development; GO:0004419 hydroxymethylglutaryl-CoA lyase activity; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0006552 L-leucine catabolic process; GO:0006629 lipid metabolic process; GO:0006637 acyl-CoA metabolic process; GO:0007005 mitochondrion organization; GO:0007584 response to nutrient; GO:0009507 chloroplast; GO:0042181 ketone biosynthetic process; GO:0042594 response to starvation; GO:0046872 metal ion binding; GO:0046951 ketone body biosynthetic process; GO:0070542 response to fatty acid
- KEGG
- EC: ec:4.1.3.4 | KO: K01640 | Pathway: 00280, 00650, 01100, 04146 | Module: M00036, M00088 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g39140.1-protein
derives_frommRNAPaHa02g39140.1
mRNAPaHa02g39140.1
part_ofgenePaHa02g39140
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94782210..94782284mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94782588..94782669mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94783355..94783547mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94783867..94784065mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94784834..94785013mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94786321..94786401mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94786492..94786655mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94787855..94787991mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94789652..94789767mRNAPaHa02g39140.1
CDS
part_ofPaHa02g39140.1-CDS-2-1787993825:94790276..94790524mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94782210..94782284mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94782588..94782669mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94783355..94783547mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94783867..94784065mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94784834..94785013mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94786321..94786401mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94786492..94786655mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94787855..94787991mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94789652..94789767mRNAPaHa02g39140.1
exon
part_ofPaHa02g39140.1-exon-2-1787993825:94790276..94790524mRNAPaHa02g39140.1
