Feature identity
- Identifier
- PaHa02g38210.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,170 bp
- Genomic location
- 2:93,761,973–93,771,702
- Strand
- +
Hass · mRNA
PaHa02g38210.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,170
- bp
- 2:93,761,973–93,771,702
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g38210
- eggNOG
- Preferred name: LOC103719222 | Seed ortholog: 337451.A0A443NMQ5 | COG: S | eggNOG OG: PCI@131567|LE-15, eIF3_N@2759|A-1
- Gene Ontology
- GO:0003729 mRNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0005852 eukaryotic translation initiation factor 3 complex; GO:0006352 DNA-templated transcription initiation; GO:0006412 translation; GO:0008180 COP9 signalosome; GO:0009640 photomorphogenesis; GO:0009908 flower development; GO:0030371 translation repressor activity; GO:0031597 cytosolic proteasome complex
- KEGG
- EC: ec:2.6.1.62, ec:6.3.3.3 | KO: K03250 | Pathway: 03010 | Module: M00123 | BRITE: 00001, 03012, 03051, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g38210.1-protein
derives_frommRNAPaHa02g38210.1
mRNAPaHa02g38210.1
part_ofgenePaHa02g38210
CDS
part_ofPaHa02g38210.1-CDS-2-1787993825:93761973..93762033mRNAPaHa02g38210.1
CDS
part_ofPaHa02g38210.1-CDS-2-1787993825:93762191..93762345mRNAPaHa02g38210.1
CDS
part_ofPaHa02g38210.1-CDS-2-1787993825:93764724..93764951mRNAPaHa02g38210.1
CDS
part_ofPaHa02g38210.1-CDS-2-1787993825:93766990..93767111mRNAPaHa02g38210.1
CDS
part_ofPaHa02g38210.1-CDS-2-1787993825:93768082..93768301mRNAPaHa02g38210.1
CDS
part_ofPaHa02g38210.1-CDS-2-1787993825:93770186..93770328mRNAPaHa02g38210.1
CDS
part_ofPaHa02g38210.1-CDS-2-1787993825:93771014..93771151mRNAPaHa02g38210.1
CDS
part_ofPaHa02g38210.1-CDS-2-1787993825:93771600..93771702mRNAPaHa02g38210.1
exon
part_ofPaHa02g38210.1-exon-2-1787993825:93761973..93762033mRNAPaHa02g38210.1
exon
part_ofPaHa02g38210.1-exon-2-1787993825:93762191..93762345mRNAPaHa02g38210.1
exon
part_ofPaHa02g38210.1-exon-2-1787993825:93764724..93764951mRNAPaHa02g38210.1
exon
part_ofPaHa02g38210.1-exon-2-1787993825:93766990..93767111mRNAPaHa02g38210.1
exon
part_ofPaHa02g38210.1-exon-2-1787993825:93768082..93768301mRNAPaHa02g38210.1
exon
part_ofPaHa02g38210.1-exon-2-1787993825:93770186..93770328mRNAPaHa02g38210.1
exon
part_ofPaHa02g38210.1-exon-2-1787993825:93771014..93771151mRNAPaHa02g38210.1
exon
part_ofPaHa02g38210.1-exon-2-1787993825:93771600..93771702mRNAPaHa02g38210.1
