Feature identity
- Identifier
- PaHa02g37560.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,740 bp
- Genomic location
- 2:92,785,514–92,799,448
- Strand
- −
Hass · mRNA
PaHa02g37560.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,740
- bp
- 2:92,785,514–92,799,448
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g37560
- eggNOG
- Preferred name: LOC109019799 | Seed ortholog: 337451.A0A443N800 | COG: S | eggNOG OG: Homeodomain@131567|ED-11, Homeodomain@2759|NR-15, Homeodomain@3193|ApY-22
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006141 regulation of purine nucleobase metabolic process; GO:0006338 chromatin remodeling; GO:0030447 filamentous growth; GO:0044182 filamentous growth of a population of unicellular organisms; GO:0045937 positive regulation of phosphate metabolic process; GO:0045944 positive regulation of transcription by RNA polymerase II; GO:0046084 adenine biosynthetic process; GO:0055070 copper ion homeostasis; GO:0120213 regulation of histidine biosynthetic process; GO:1900373 positive regulation of purine nucleotide biosynthetic process; GO:1900445 positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus
- KEGG
- KO: K02646, K09301, K09307, K09320, K09326, K09327, K09364, K09451, K09533, K22234 | Pathway: 04111 | BRITE: 00001, 03000, 03021, 03041, 03110
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g37560.1-protein
derives_frommRNAPaHa02g37560.1
mRNAPaHa02g37560.1
part_ofgenePaHa02g37560
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92785514..92785586mRNAPaHa02g37560.1
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92789041..92789135mRNAPaHa02g37560.1
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92789530..92789619mRNAPaHa02g37560.1
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92789711..92790178mRNAPaHa02g37560.1
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92791860..92791939mRNAPaHa02g37560.1
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92793176..92793814mRNAPaHa02g37560.1
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92793918..92794022mRNAPaHa02g37560.1
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92797084..92797115mRNAPaHa02g37560.1
CDS
part_ofPaHa02g37560.1-CDS-2-1787993825:92799291..92799448mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92785514..92785586mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92789041..92789135mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92789530..92789619mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92789711..92790178mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92791860..92791939mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92793176..92793814mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92793918..92794022mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92797084..92797115mRNAPaHa02g37560.1
exon
part_ofPaHa02g37560.1-exon-2-1787993825:92799291..92799448mRNAPaHa02g37560.1
