Feature identity
- Identifier
- PaHa02g37220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,176 bp
- Genomic location
- 2:92,273,767–92,280,246
- Strand
- +
Hass · mRNA
PaHa02g37220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,176
- bp
- 2:92,273,767–92,280,246
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g37220
- eggNOG
- Preferred name: LOC107955183 | Seed ortholog: 337451.A0A443N7W7 | COG: COG4886 | eggNOG OG: FA_desaturase_2@131567|A-1, FA_desaturase_2@3398|XS-20!, LRR_8@131567|C-2!, LRR_8@3193|SY-20
- Gene Ontology
- GO:0002213 defense response to insect; GO:0005515 protein binding; GO:0006631 fatty acid metabolic process; GO:0006636 unsaturated fatty acid biosynthetic process; GO:0006952 defense response; GO:0008610 lipid biosynthetic process; GO:0009507 chloroplast; GO:0009534 chloroplast thylakoid; GO:0009536 plastid; GO:0009570 chloroplast stroma; GO:0009695 jasmonic acid biosynthetic process; GO:0009960 endosperm development; GO:0042742 defense response to bacterium; GO:0045300 stearoyl-[ACP] desaturase activity; GO:0051607 defense response to virus; GO:0055089 fatty acid homeostasis; GO:2000014 regulation of endosperm development; GO:2000022 regulation of jasmonic acid mediated signaling pathway; GO:2000031 regulation of salicylic acid mediated signaling pathway
- KEGG
- EC: ec:1.14.19.11, ec:1.14.19.2, ec:1.14.19.26 | KO: K03921 | Pathway: 00061, 01040, 01100, 01212 | BRITE: 00001, 01000, 01004
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g37220.1-protein
derives_frommRNAPaHa02g37220.1
mRNAPaHa02g37220.1
part_ofgenePaHa02g37220
CDS
part_ofPaHa02g37220.1-CDS-2-1787993825:92273767..92273873mRNAPaHa02g37220.1
CDS
part_ofPaHa02g37220.1-CDS-2-1787993825:92277831..92278341mRNAPaHa02g37220.1
CDS
part_ofPaHa02g37220.1-CDS-2-1787993825:92279689..92280246mRNAPaHa02g37220.1
exon
part_ofPaHa02g37220.1-exon-2-1787993825:92273767..92273873mRNAPaHa02g37220.1
exon
part_ofPaHa02g37220.1-exon-2-1787993825:92277831..92278341mRNAPaHa02g37220.1
exon
part_ofPaHa02g37220.1-exon-2-1787993825:92279689..92280246mRNAPaHa02g37220.1
