Feature identity
- Identifier
- PaHa02g32410.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,280 bp
- Genomic location
- 2:84,838,038–84,851,190
- Strand
- −
Hass · mRNA
PaHa02g32410.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,280
- bp
- 2:84,838,038–84,851,190
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g32410
- eggNOG
- Preferred name: BLH2 | Seed ortholog: 4432.A0A1U7ZSF6 | COG: S | eggNOG OG: Homeobox_KN@131567|A-1*, Homeobox_KN@1437183|jN-20, Homeobox_KN@2759|C-2!, Homeobox_KN@3398|Ly-15, Homeobox_KN@58023|Dh-11, POX@131567|A-1*, POX@3193|V-7, POX@3398|CX-14
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0009965 leaf morphogenesis; GO:0048363 mucilage pectin metabolic process
- KEGG
- EC: ec:2.1.1.354 | KO: K09355, K09359, K15610, K15611, K15613, K16670, K16671, K16672, K19383, K19553, K19554, K22748, K24889, K24890, K24891 | Pathway: 00310, 01100, 04113, 04148, 04350, 04391, 04550, 05202 | BRITE: 00001, 01000, 03000, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g32410.1-protein
derives_frommRNAPaHa02g32410.1
mRNAPaHa02g32410.1
part_ofgenePaHa02g32410
CDS
part_ofPaHa02g32410.1-CDS-2-1787993825:84838038..84838541mRNAPaHa02g32410.1
CDS
part_ofPaHa02g32410.1-CDS-2-1787993825:84847053..84847113mRNAPaHa02g32410.1
CDS
part_ofPaHa02g32410.1-CDS-2-1787993825:84848341..84848726mRNAPaHa02g32410.1
CDS
part_ofPaHa02g32410.1-CDS-2-1787993825:84849862..84851190mRNAPaHa02g32410.1
exon
part_ofPaHa02g32410.1-exon-2-1787993825:84838038..84838541mRNAPaHa02g32410.1
exon
part_ofPaHa02g32410.1-exon-2-1787993825:84847053..84847113mRNAPaHa02g32410.1
exon
part_ofPaHa02g32410.1-exon-2-1787993825:84848341..84848726mRNAPaHa02g32410.1
exon
part_ofPaHa02g32410.1-exon-2-1787993825:84849862..84851190mRNAPaHa02g32410.1
