Feature identity
- Identifier
- PaHa02g31880.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 966 bp
- Genomic location
- 2:84,054,374–84,059,049
- Strand
- +
Hass · mRNA
PaHa02g31880.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 966
- bp
- 2:84,054,374–84,059,049
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g31880
- eggNOG
- Preferred name: KAN4 | Seed ortholog: 337451.A0A443N6Q2 | COG: S | eggNOG OG: Myb_DNA-binding@131567|dl-20, Myb_DNA-binding@2759|pK-22, Myb_DNA-binding@3193|App-30, Myb_DNA-binding@33090|Adt-29, Myb_DNA-binding@58023|CQp-34
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009505 plant-type cell wall; GO:0048481 plant ovule development; GO:0080060 integument development
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g31880.1-protein
derives_frommRNAPaHa02g31880.1
mRNAPaHa02g31880.1
part_ofgenePaHa02g31880
CDS
part_ofPaHa02g31880.1-CDS-2-1787993825:84054374..84054776mRNAPaHa02g31880.1
CDS
part_ofPaHa02g31880.1-CDS-2-1787993825:84054935..84055011mRNAPaHa02g31880.1
CDS
part_ofPaHa02g31880.1-CDS-2-1787993825:84055239..84055275mRNAPaHa02g31880.1
CDS
part_ofPaHa02g31880.1-CDS-2-1787993825:84055466..84055604mRNAPaHa02g31880.1
CDS
part_ofPaHa02g31880.1-CDS-2-1787993825:84057781..84057889mRNAPaHa02g31880.1
CDS
part_ofPaHa02g31880.1-CDS-2-1787993825:84058849..84059049mRNAPaHa02g31880.1
exon
part_ofPaHa02g31880.1-exon-2-1787993825:84054374..84054776mRNAPaHa02g31880.1
exon
part_ofPaHa02g31880.1-exon-2-1787993825:84054935..84055011mRNAPaHa02g31880.1
exon
part_ofPaHa02g31880.1-exon-2-1787993825:84055239..84055275mRNAPaHa02g31880.1
exon
part_ofPaHa02g31880.1-exon-2-1787993825:84055466..84055604mRNAPaHa02g31880.1
exon
part_ofPaHa02g31880.1-exon-2-1787993825:84057781..84057889mRNAPaHa02g31880.1
exon
part_ofPaHa02g31880.1-exon-2-1787993825:84058849..84059049mRNAPaHa02g31880.1
