Feature identity
- Identifier
- PaHa02g31310.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,542 bp
- Genomic location
- 2:83,243,228–83,274,505
- Strand
- −
Hass · mRNA
PaHa02g31310.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,542
- bp
- 2:83,243,228–83,274,505
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g31310
- eggNOG
- Preferred name: LOC104611219 | Seed ortholog: 337451.A0A3S4N906 | COG: COG1094 | eggNOG OG: KH_1@131567|B-2, KH_1@2759|AR-7, KH_1@3398|iB-17, KH_1@35493|Lh-13
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:1900057 positive regulation of leaf senescence; GO:2000028 regulation of photoperiodism, flowering
- KEGG
- KO: K13210 | BRITE: 00001, 03019, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g31310.1-protein
derives_frommRNAPaHa02g31310.1
mRNAPaHa02g31310.1
part_ofgenePaHa02g31310
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83243228..83243244mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83244432..83244559mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83244651..83244903mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83245045..83245399mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83249041..83249157mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83271995..83272066mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83272152..83272247mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83272612..83272797mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83272925..83273055mRNAPaHa02g31310.1
CDS
part_ofPaHa02g31310.1-CDS-2-1787993825:83274319..83274505mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83243228..83243244mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83244432..83244559mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83244651..83244903mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83245045..83245399mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83249041..83249157mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83271995..83272066mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83272152..83272247mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83272612..83272797mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83272925..83273055mRNAPaHa02g31310.1
exon
part_ofPaHa02g31310.1-exon-2-1787993825:83274319..83274505mRNAPaHa02g31310.1
