Feature identity
- Identifier
- PaHa02g31220.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,101 bp
- Genomic location
- 2:83,074,511–83,076,580
- Strand
- −
Hass · mRNA
PaHa02g31220.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,101
- bp
- 2:83,074,511–83,076,580
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g31220
- eggNOG
- Preferred name: LOC123119581 | Seed ortholog: 337451.A0A3S3M6K2 | COG: S | eggNOG OG: Myb_DNA-binding@33090|B-2!, Myb_DNA-binding@3398|Ab-9, Myb_DNA-binding@35493|X-6
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005829 cytosol; GO:0006355 regulation of DNA-templated transcription; GO:0010629 negative regulation of gene expression; GO:0048449 floral organ formation; GO:0090701 specification of plant organ identity
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g31220.1-protein
derives_frommRNAPaHa02g31220.1
mRNAPaHa02g31220.1
part_ofgenePaHa02g31220
CDS
part_ofPaHa02g31220.1-CDS-2-1787993825:83074511..83074810mRNAPaHa02g31220.1
CDS
part_ofPaHa02g31220.1-CDS-2-1787993825:83074927..83075003mRNAPaHa02g31220.1
CDS
part_ofPaHa02g31220.1-CDS-2-1787993825:83075620..83075968mRNAPaHa02g31220.1
CDS
part_ofPaHa02g31220.1-CDS-2-1787993825:83076079..83076245mRNAPaHa02g31220.1
CDS
part_ofPaHa02g31220.1-CDS-2-1787993825:83076373..83076580mRNAPaHa02g31220.1
exon
part_ofPaHa02g31220.1-exon-2-1787993825:83074511..83074810mRNAPaHa02g31220.1
exon
part_ofPaHa02g31220.1-exon-2-1787993825:83074927..83075003mRNAPaHa02g31220.1
exon
part_ofPaHa02g31220.1-exon-2-1787993825:83075620..83075968mRNAPaHa02g31220.1
exon
part_ofPaHa02g31220.1-exon-2-1787993825:83076079..83076245mRNAPaHa02g31220.1
exon
part_ofPaHa02g31220.1-exon-2-1787993825:83076373..83076580mRNAPaHa02g31220.1
