Feature identity
- Identifier
- PaHa02g29960.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,074 bp
- Genomic location
- 2:80,384,952–80,397,686
- Strand
- +
Hass · mRNA
PaHa02g29960.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,074
- bp
- 2:80,384,952–80,397,686
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g29960
- eggNOG
- Preferred name: MDHG | Seed ortholog: 337451.A0A443N6A5 | COG: S | eggNOG OG: Ldh_1_C@131567|C-2, Ldh_1_C@33090|vT-21, Ldh_1_C@3398|BTN-27, Ldh_1_N@131567|BL-9, Ldh_1_N@1437183|Csg-32, Ldh_1_N@33090|xq-23, Ldh_1_N@3398|BaT-29
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005886 plasma membrane; GO:0009507 chloroplast; GO:0009941 chloroplast envelope; GO:0016615 malate dehydrogenase activity; GO:0031998 regulation of fatty acid beta-oxidation; GO:0042579 microbody; GO:0048046 apoplast; GO:0080093 regulation of photorespiration
- KEGG
- EC: ec:1.1.1.37 | KO: K00026 | Pathway: 00020, 00270, 00620, 00630, 00710, 01100, 01110, 01200 | Module: M00009, M00011, M00012, M00168, M00171 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g29960.1-protein
derives_frommRNAPaHa02g29960.1
mRNAPaHa02g29960.1
part_ofgenePaHa02g29960
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80384952..80385023mRNAPaHa02g29960.1
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80387248..80387463mRNAPaHa02g29960.1
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80393175..80393489mRNAPaHa02g29960.1
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80395055..80395144mRNAPaHa02g29960.1
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80395294..80395377mRNAPaHa02g29960.1
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80396544..80396579mRNAPaHa02g29960.1
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80396684..80396773mRNAPaHa02g29960.1
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80396892..80396986mRNAPaHa02g29960.1
CDS
part_ofPaHa02g29960.1-CDS-2-1787993825:80397611..80397686mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80384952..80385023mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80387248..80387463mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80393175..80393489mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80395055..80395144mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80395294..80395377mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80396544..80396579mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80396684..80396773mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80396892..80396986mRNAPaHa02g29960.1
exon
part_ofPaHa02g29960.1-exon-2-1787993825:80397611..80397686mRNAPaHa02g29960.1
