Feature identity
- Identifier
- PaHa02g28680.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,902 bp
- Genomic location
- 2:78,174,961–78,181,447
- Strand
- +
Hass · mRNA
PaHa02g28680.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,902
- bp
- 2:78,174,961–78,181,447
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g28680
- eggNOG
- Preferred name: DOX1 | Seed ortholog: 337451.A0A3S3PUW1 | COG: S | eggNOG OG: An_peroxidase@131567|Gn-14, An_peroxidase@3398|ks-24
- Gene Ontology
- GO:0001561 fatty acid alpha-oxidation; GO:0005576 extracellular region; GO:0005811 lipid droplet; GO:0006629 lipid metabolic process; GO:0006979 response to oxidative stress; GO:0009627 systemic acquired resistance; GO:0009737 response to abscisic acid; GO:0009751 response to salicylic acid; GO:0012511 monolayer-surrounded lipid storage body; GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; GO:0034614 cellular response to reactive oxygen species; GO:0042742 defense response to bacterium; GO:0050832 defense response to fungus; GO:0051213 dioxygenase activity; GO:0071446 cellular response to salicylic acid stimulus; GO:0071732 cellular response to nitric oxide; GO:0102672 fatty acid alpha-dioxygenase activity; GO:1902609 (R)-2-hydroxy-alpha-linolenic acid biosynthetic process
- KEGG
- EC: ec:1.13.11.92 | KO: K10529 | Pathway: 00592, 01110 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g28680.1-protein
derives_frommRNAPaHa02g28680.1
mRNAPaHa02g28680.1
part_ofgenePaHa02g28680
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78174961..78175047mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78175483..78175746mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78175867..78176019mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78176265..78176398mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78176498..78176711mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78178092..78178237mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78178630..78178857mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78179520..78179722mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78180119..78180362mRNAPaHa02g28680.1
CDS
part_ofPaHa02g28680.1-CDS-2-1787993825:78181219..78181447mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78174961..78175047mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78175483..78175746mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78175867..78176019mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78176265..78176398mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78176498..78176711mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78178092..78178237mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78178630..78178857mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78179520..78179722mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78180119..78180362mRNAPaHa02g28680.1
exon
part_ofPaHa02g28680.1-exon-2-1787993825:78181219..78181447mRNAPaHa02g28680.1
