Feature identity
- Identifier
- PaHa02g28020.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 345 bp
- Genomic location
- 2:77,037,654–77,045,019
- Strand
- −
Hass · mRNA
PaHa02g28020.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 345
- bp
- 2:77,037,654–77,045,019
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g28020
- eggNOG
- Preferred name: TRX1 | Seed ortholog: 337451.A0A443N5S5 | COG: S | eggNOG OG: Thioredoxin@131567|WD-15, Thioredoxin@2759|CZY-24!, Thioredoxin@3193|IpX-31, Thioredoxin@3398|Xzp-41, Thioredoxin@58023|LWJ-33
- Gene Ontology
- GO:0004857 enzyme inhibitor activity; GO:0005515 protein binding; GO:0005737 cytoplasm; GO:0005829 cytosol; GO:0006979 response to oxidative stress; GO:0008047 enzyme activator activity; GO:0009409 response to cold; GO:0010497 plasmodesmata-mediated intercellular transport; GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor; GO:0043085 positive regulation of catalytic activity; GO:0043086 negative regulation of catalytic activity
- KEGG
- KO: K03671 | BRITE: 00001, 03110
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g28020.1-protein
derives_frommRNAPaHa02g28020.1
mRNAPaHa02g28020.1
part_ofgenePaHa02g28020
CDS
part_ofPaHa02g28020.1-CDS-2-1787993825:77037654..77037788mRNAPaHa02g28020.1
CDS
part_ofPaHa02g28020.1-CDS-2-1787993825:77037922..77038044mRNAPaHa02g28020.1
CDS
part_ofPaHa02g28020.1-CDS-2-1787993825:77044933..77045019mRNAPaHa02g28020.1
exon
part_ofPaHa02g28020.1-exon-2-1787993825:77037654..77037788mRNAPaHa02g28020.1
exon
part_ofPaHa02g28020.1-exon-2-1787993825:77037922..77038044mRNAPaHa02g28020.1
exon
part_ofPaHa02g28020.1-exon-2-1787993825:77044933..77045019mRNAPaHa02g28020.1
