Feature identity
- Identifier
- PaHa02g27510.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,962 bp
- Genomic location
- 2:75,912,539–75,922,477
- Strand
- +
Hass · mRNA
PaHa02g27510.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,962
- bp
- 2:75,912,539–75,922,477
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g27510
- eggNOG
- Preferred name: LOC100832047 | Seed ortholog: 337451.A0A3S3NRL5 | COG: S | eggNOG OG: Rad21_Rec8_N@131567|A-1*, Rad21_Rec8_N@2759|Ae-8, Rad21_Rec8_N@33090|NV-16, Rad21_Rec8_N@3398|SE-18
- Gene Ontology
- GO:0000278 mitotic cell cycle; GO:0000987 cis-regulatory region sequence-specific DNA binding; GO:0003674 molecular_function; GO:0003682 chromatin binding; GO:0003684 damaged DNA binding; GO:0003690 double-stranded DNA binding; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0009555 pollen development; GO:0009561 megagametogenesis; GO:0019901 protein kinase binding; GO:0043565 sequence-specific DNA binding; GO:0061776 ATP-dependent topological DNA co-entrapment activity; GO:0106222 lncRNA binding; GO:0140297 DNA-binding transcription factor binding
- KEGG
- KO: K06670 | Pathway: 04110, 04111, 04113 | BRITE: 00001, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g27510.1-protein
derives_frommRNAPaHa02g27510.1
mRNAPaHa02g27510.1
part_ofgenePaHa02g27510
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75912539..75912662mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75916628..75916889mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75916983..75917029mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75917132..75917181mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75917270..75917337mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75917419..75917780mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75917919..75918030mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75919058..75919194mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75919272..75919756mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75920465..75920501mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75920707..75920749mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75920832..75920967mRNAPaHa02g27510.1
CDS
part_ofPaHa02g27510.1-CDS-2-1787993825:75922379..75922477mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75912539..75912662mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75916628..75916889mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75916983..75917029mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75917132..75917181mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75917270..75917337mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75917419..75917780mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75917919..75918030mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75919058..75919194mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75919272..75919756mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75920465..75920501mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75920707..75920749mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75920832..75920967mRNAPaHa02g27510.1
exon
part_ofPaHa02g27510.1-exon-2-1787993825:75922379..75922477mRNAPaHa02g27510.1
