Feature identity
- Identifier
- PaHa02g23800.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,929 bp
- Genomic location
- 2:69,264,347–69,277,159
- Strand
- −
Hass · mRNA
PaHa02g23800.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,929
- bp
- 2:69,264,347–69,277,159
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g23800
- eggNOG
- Preferred name: SSRP1 | Seed ortholog: 337451.A0A3S3MBS1 | COG: S | eggNOG OG: HMG_box@131567|Aj-7, HMG_box@2759|Og-14, POB3_N@131567|A-1, Rtt106@131567|A-1*, Rtt106@2759|b-5, SSrecog@2759|A-1
- Gene Ontology
- GO:0000741 karyogamy; GO:0000791 euchromatin; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0010197 polar nucleus fusion; GO:0010228 vegetative to reproductive phase transition of meristem; GO:0035101 FACT complex
- KEGG
- EC: ec:2.1.1.354 | KO: K09272 | Pathway: 00310, 01100 | BRITE: 00001, 03000, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g23800.1-protein
derives_frommRNAPaHa02g23800.1
mRNAPaHa02g23800.1
part_ofgenePaHa02g23800
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69264347..69264471mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69266633..69266711mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69267314..69267490mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69267766..69267864mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69267964..69268111mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69268231..69268382mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69268496..69268693mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69272044..69272136mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69272238..69272324mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69272566..69272674mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69273087..69273181mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69273287..69273370mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69273518..69273654mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69275246..69275351mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69275784..69275969mRNAPaHa02g23800.1
CDS
part_ofPaHa02g23800.1-CDS-2-1787993825:69277106..69277159mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69264347..69264471mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69266633..69266711mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69267314..69267490mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69267766..69267864mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69267964..69268111mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69268231..69268382mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69268496..69268693mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69272044..69272136mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69272238..69272324mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69272566..69272674mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69273087..69273181mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69273287..69273370mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69273518..69273654mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69275246..69275351mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69275784..69275969mRNAPaHa02g23800.1
exon
part_ofPaHa02g23800.1-exon-2-1787993825:69277106..69277159mRNAPaHa02g23800.1
