Feature identity
- Identifier
- PaHa02g23110.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,113 bp
- Genomic location
- 2:67,623,748–67,630,779
- Strand
- −
Hass · mRNA
PaHa02g23110.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,113
- bp
- 2:67,623,748–67,630,779
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g23110
- eggNOG
- Preferred name: PEX2 | Seed ortholog: 337451.A0A3S3MGR8 | COG: S | eggNOG OG: Pex2_Pex12@131567|A-1*, Pex2_Pex12@2759|E-3, zf-C3HC4@131567|Me-13, zf-C3HC4@2759|ABC-19
- Gene Ontology
- GO:0004842 ubiquitin-protein transferase activity; GO:0005515 protein binding; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0006513 protein monoubiquitination; GO:0006635 fatty acid beta-oxidation; GO:0007031 peroxisome organization; GO:0009506 plasmodesma; GO:0009640 photomorphogenesis; GO:0016558 protein import into peroxisome matrix; GO:0061630 ubiquitin protein ligase activity
- KEGG
- EC: ec:2.3.2.27, ec:2.3.2.31, ec:2.7.11.1 | KO: K06664 | Pathway: 04146 | BRITE: 00001, 04121
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g23110.1-protein
derives_frommRNAPaHa02g23110.1
mRNAPaHa02g23110.1
part_ofgenePaHa02g23110
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67623748..67623819mRNAPaHa02g23110.1
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67623964..67624075mRNAPaHa02g23110.1
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67625679..67625845mRNAPaHa02g23110.1
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67626139..67626256mRNAPaHa02g23110.1
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67627049..67627149mRNAPaHa02g23110.1
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67627228..67627364mRNAPaHa02g23110.1
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67629373..67629529mRNAPaHa02g23110.1
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67629649..67629762mRNAPaHa02g23110.1
CDS
part_ofPaHa02g23110.1-CDS-2-1787993825:67630645..67630779mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67623748..67623819mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67623964..67624075mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67625679..67625845mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67626139..67626256mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67627049..67627149mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67627228..67627364mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67629373..67629529mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67629649..67629762mRNAPaHa02g23110.1
exon
part_ofPaHa02g23110.1-exon-2-1787993825:67630645..67630779mRNAPaHa02g23110.1
