Feature identity
- Identifier
- PaHa02g23020.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,707 bp
- Genomic location
- 2:67,371,942–67,390,307
- Strand
- −
Hass · mRNA
PaHa02g23020.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,707
- bp
- 2:67,371,942–67,390,307
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g23020
- eggNOG
- Preferred name: TCX5 | Seed ortholog: 337451.A0A443N4J4 | COG: S | eggNOG OG: TCR@131567|A-1*, TCR@2759|AP-7, TCR@3193|FG-14, TCR@3398|Fx-15
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K21776 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g23020.1-protein
derives_frommRNAPaHa02g23020.1
mRNAPaHa02g23020.1
part_ofgenePaHa02g23020
CDS
part_ofPaHa02g23020.1-CDS-2-1787993825:67371942..67372147mRNAPaHa02g23020.1
CDS
part_ofPaHa02g23020.1-CDS-2-1787993825:67372766..67373188mRNAPaHa02g23020.1
CDS
part_ofPaHa02g23020.1-CDS-2-1787993825:67379446..67379540mRNAPaHa02g23020.1
CDS
part_ofPaHa02g23020.1-CDS-2-1787993825:67380214..67380314mRNAPaHa02g23020.1
CDS
part_ofPaHa02g23020.1-CDS-2-1787993825:67380932..67381288mRNAPaHa02g23020.1
CDS
part_ofPaHa02g23020.1-CDS-2-1787993825:67385617..67385794mRNAPaHa02g23020.1
CDS
part_ofPaHa02g23020.1-CDS-2-1787993825:67389036..67389143mRNAPaHa02g23020.1
CDS
part_ofPaHa02g23020.1-CDS-2-1787993825:67390069..67390307mRNAPaHa02g23020.1
exon
part_ofPaHa02g23020.1-exon-2-1787993825:67371942..67372147mRNAPaHa02g23020.1
exon
part_ofPaHa02g23020.1-exon-2-1787993825:67372766..67373188mRNAPaHa02g23020.1
exon
part_ofPaHa02g23020.1-exon-2-1787993825:67379446..67379540mRNAPaHa02g23020.1
exon
part_ofPaHa02g23020.1-exon-2-1787993825:67380214..67380314mRNAPaHa02g23020.1
exon
part_ofPaHa02g23020.1-exon-2-1787993825:67380932..67381288mRNAPaHa02g23020.1
exon
part_ofPaHa02g23020.1-exon-2-1787993825:67385617..67385794mRNAPaHa02g23020.1
exon
part_ofPaHa02g23020.1-exon-2-1787993825:67389036..67389143mRNAPaHa02g23020.1
exon
part_ofPaHa02g23020.1-exon-2-1787993825:67390069..67390307mRNAPaHa02g23020.1
