Feature identity
- Identifier
- PaHa02g19500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 510 bp
- Genomic location
- 2:51,044,883–51,047,241
- Strand
- −
Hass · mRNA
PaHa02g19500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 510
- bp
- 2:51,044,883–51,047,241
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g19500
- eggNOG
- Preferred name: CYP704C1 | Seed ortholog: 337451.A0A3S3MT77 | COG: S | eggNOG OG: p450@131567|CK-8, p450@2759|LS-11, p450@3193|ECi-21, p450@3398|FNB-22
- Gene Ontology
- GO:0000325 plant-type vacuole; GO:0002213 defense response to insect; GO:0005515 protein binding; GO:0005575 cellular_component; GO:0005576 extracellular region; GO:0005739 mitochondrion; GO:0005783 endoplasmic reticulum; GO:0005789 endoplasmic reticulum membrane; GO:0006631 fatty acid metabolic process; GO:0008150 biological_process; GO:0008610 lipid biosynthetic process; GO:0009507 chloroplast; GO:0009555 pollen development; GO:0009611 response to wounding; GO:0009694 jasmonic acid metabolic process; GO:0010025 wax biosynthetic process; GO:0010154 fruit development; GO:0010214 seed coat development; GO:0010345 suberin biosynthetic process; GO:0018685 alkane 1-monooxygenase activity; GO:0042761 very long-chain fatty acid biosynthetic process; GO:0048480 stigma development; GO:0048653 anther development; GO:0052694 jasmonoyl-isoleucine-12-hydroxylase activity; GO:0080133 midchain alkane hydroxylase activity
- KEGG
- EC: ec:1.14.14.129, ec:1.14.14.48, ec:1.14.14.49, ec:1.14.14.80 | KO: K13407, K15398, K15401, K15402, K15405, K20495, K20544, K20624, K20665, K20768, K20769 | Pathway: 00071, 00073, 01100, 01110 | BRITE: 00001, 00199, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g19500.1-protein
derives_frommRNAPaHa02g19500.1
mRNAPaHa02g19500.1
part_ofgenePaHa02g19500
CDS
part_ofPaHa02g19500.1-CDS-2-1787993825:51044883..51044957mRNAPaHa02g19500.1
CDS
part_ofPaHa02g19500.1-CDS-2-1787993825:51045469..51045548mRNAPaHa02g19500.1
CDS
part_ofPaHa02g19500.1-CDS-2-1787993825:51045632..51045672mRNAPaHa02g19500.1
CDS
part_ofPaHa02g19500.1-CDS-2-1787993825:51045791..51045979mRNAPaHa02g19500.1
CDS
part_ofPaHa02g19500.1-CDS-2-1787993825:51047117..51047241mRNAPaHa02g19500.1
exon
part_ofPaHa02g19500.1-exon-2-1787993825:51044883..51044957mRNAPaHa02g19500.1
exon
part_ofPaHa02g19500.1-exon-2-1787993825:51045469..51045548mRNAPaHa02g19500.1
exon
part_ofPaHa02g19500.1-exon-2-1787993825:51045632..51045672mRNAPaHa02g19500.1
exon
part_ofPaHa02g19500.1-exon-2-1787993825:51045791..51045979mRNAPaHa02g19500.1
exon
part_ofPaHa02g19500.1-exon-2-1787993825:51047117..51047241mRNAPaHa02g19500.1
