Feature identity
- Identifier
- PaHa02g15040.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 375 bp
- Genomic location
- 2:27,562,493–27,570,838
- Strand
- −
Hass · mRNA
PaHa02g15040.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 375
- bp
- 2:27,562,493–27,570,838
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g15040
- eggNOG
- Preferred name: LOC104599964 | Seed ortholog: 337451.A0A443N397 | COG: S | eggNOG OG: WRKY@131567|A-1*, WRKY@2759|VE-17, WRKY@3398|fs-19
- Gene Ontology
- GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0045893 positive regulation of DNA-templated transcription; GO:1901141 regulation of lignin biosynthetic process; GO:1904369 positive regulation of sclerenchyma cell differentiation; GO:1990170 stress response to cadmium ion
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g15040.1-protein
derives_frommRNAPaHa02g15040.1
mRNAPaHa02g15040.1
part_ofgenePaHa02g15040
CDS
part_ofPaHa02g15040.1-CDS-2-1787993825:27562493..27562661mRNAPaHa02g15040.1
CDS
part_ofPaHa02g15040.1-CDS-2-1787993825:27570633..27570838mRNAPaHa02g15040.1
exon
part_ofPaHa02g15040.1-exon-2-1787993825:27562493..27562661mRNAPaHa02g15040.1
exon
part_ofPaHa02g15040.1-exon-2-1787993825:27570633..27570838mRNAPaHa02g15040.1
