Feature identity
- Identifier
- PaHa02g10500.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 984 bp
- Genomic location
- 2:17,241,458–17,249,814
- Strand
- −
Hass · mRNA
PaHa02g10500.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 984
- bp
- 2:17,241,458–17,249,814
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g10500
- eggNOG
- Preferred name: NFYA1 | Seed ortholog: 337451.A0A443N2D6 | COG: S | eggNOG OG: CBFB_NFYA@2759|A-1, CBFB_NFYA@33090|AE-10
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:0009555 pollen development; GO:0009793 embryo development ending in seed dormancy; GO:0010262 somatic embryogenesis; GO:0016602 CCAAT-binding factor complex; GO:0045892 negative regulation of DNA-templated transcription; GO:0048316 seed development; GO:0048510 regulation of timing of transition from vegetative to reproductive phase; GO:0055046 microgametogenesis
- KEGG
- KO: K08064 | Pathway: 04612, 05017, 05152 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g10500.1-protein
derives_frommRNAPaHa02g10500.1
mRNAPaHa02g10500.1
part_ofgenePaHa02g10500
CDS
part_ofPaHa02g10500.1-CDS-2-1787993825:17241458..17241880mRNAPaHa02g10500.1
CDS
part_ofPaHa02g10500.1-CDS-2-1787993825:17245407..17245571mRNAPaHa02g10500.1
CDS
part_ofPaHa02g10500.1-CDS-2-1787993825:17245939..17246010mRNAPaHa02g10500.1
CDS
part_ofPaHa02g10500.1-CDS-2-1787993825:17246129..17246241mRNAPaHa02g10500.1
CDS
part_ofPaHa02g10500.1-CDS-2-1787993825:17249604..17249814mRNAPaHa02g10500.1
exon
part_ofPaHa02g10500.1-exon-2-1787993825:17241458..17241880mRNAPaHa02g10500.1
exon
part_ofPaHa02g10500.1-exon-2-1787993825:17245407..17245571mRNAPaHa02g10500.1
exon
part_ofPaHa02g10500.1-exon-2-1787993825:17245939..17246010mRNAPaHa02g10500.1
exon
part_ofPaHa02g10500.1-exon-2-1787993825:17246129..17246241mRNAPaHa02g10500.1
exon
part_ofPaHa02g10500.1-exon-2-1787993825:17249604..17249814mRNAPaHa02g10500.1
