Feature identity
- Identifier
- PaHa02g09100.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,725 bp
- Genomic location
- 2:15,113,922–15,119,491
- Strand
- +
Hass · mRNA
PaHa02g09100.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,725
- bp
- 2:15,113,922–15,119,491
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g09100
- eggNOG
- Preferred name: HTH | Seed ortholog: 337451.A0A443N242 | COG: COG2303 | eggNOG OG: GMC_oxred_C@131567|O-4!, GMC_oxred_C@3193|CDF-23, GMC_oxred_N@131567|Y-5!, GMC_oxred_N@3193|zU-20, GMC_oxred_N@3398|BRf-25
- Gene Ontology
- GO:0005576 extracellular region; GO:0007267 cell-cell signaling; GO:0009553 embryo sac development; GO:0010430 fatty acid omega-oxidation; GO:0046593 mandelonitrile lyase activity; GO:0050660 flavin adenine dinucleotide binding
- KEGG
- KO: K15403 | Pathway: 00073 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g09100.1-protein
derives_frommRNAPaHa02g09100.1
mRNAPaHa02g09100.1
part_ofgenePaHa02g09100
CDS
part_ofPaHa02g09100.1-CDS-2-1787993825:15113922..15113979mRNAPaHa02g09100.1
CDS
part_ofPaHa02g09100.1-CDS-2-1787993825:15114599..15114944mRNAPaHa02g09100.1
CDS
part_ofPaHa02g09100.1-CDS-2-1787993825:15116327..15116637mRNAPaHa02g09100.1
CDS
part_ofPaHa02g09100.1-CDS-2-1787993825:15117844..15118229mRNAPaHa02g09100.1
CDS
part_ofPaHa02g09100.1-CDS-2-1787993825:15118736..15119304mRNAPaHa02g09100.1
CDS
part_ofPaHa02g09100.1-CDS-2-1787993825:15119437..15119491mRNAPaHa02g09100.1
exon
part_ofPaHa02g09100.1-exon-2-1787993825:15113922..15113979mRNAPaHa02g09100.1
exon
part_ofPaHa02g09100.1-exon-2-1787993825:15114599..15114944mRNAPaHa02g09100.1
exon
part_ofPaHa02g09100.1-exon-2-1787993825:15116327..15116637mRNAPaHa02g09100.1
exon
part_ofPaHa02g09100.1-exon-2-1787993825:15117844..15118229mRNAPaHa02g09100.1
exon
part_ofPaHa02g09100.1-exon-2-1787993825:15118736..15119304mRNAPaHa02g09100.1
exon
part_ofPaHa02g09100.1-exon-2-1787993825:15119437..15119491mRNAPaHa02g09100.1
