Feature identity
- Identifier
- PaHa02g08340.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 729 bp
- Genomic location
- 2:13,160,023–13,171,238
- Strand
- +
Hass · mRNA
PaHa02g08340.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 729
- bp
- 2:13,160,023–13,171,238
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g08340
- eggNOG
- Preferred name: TCX4 | Seed ortholog: 337451.A0A3S4N451 | COG: S | eggNOG OG: TCR@131221|Lt-19, TCR@131567|A-1*, TCR@2759|AQ-7!
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription
- KEGG
- KO: K21776 | Pathway: 04218, 04814 | BRITE: 00001
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g08340.1-protein
derives_frommRNAPaHa02g08340.1
mRNAPaHa02g08340.1
part_ofgenePaHa02g08340
CDS
part_ofPaHa02g08340.1-CDS-2-1787993825:13160023..13160148mRNAPaHa02g08340.1
CDS
part_ofPaHa02g08340.1-CDS-2-1787993825:13161621..13161806mRNAPaHa02g08340.1
CDS
part_ofPaHa02g08340.1-CDS-2-1787993825:13161926..13162014mRNAPaHa02g08340.1
CDS
part_ofPaHa02g08340.1-CDS-2-1787993825:13162107..13162147mRNAPaHa02g08340.1
CDS
part_ofPaHa02g08340.1-CDS-2-1787993825:13162245..13162341mRNAPaHa02g08340.1
CDS
part_ofPaHa02g08340.1-CDS-2-1787993825:13170981..13171059mRNAPaHa02g08340.1
CDS
part_ofPaHa02g08340.1-CDS-2-1787993825:13171128..13171238mRNAPaHa02g08340.1
exon
part_ofPaHa02g08340.1-exon-2-1787993825:13160023..13160148mRNAPaHa02g08340.1
exon
part_ofPaHa02g08340.1-exon-2-1787993825:13161621..13161806mRNAPaHa02g08340.1
exon
part_ofPaHa02g08340.1-exon-2-1787993825:13161926..13162014mRNAPaHa02g08340.1
exon
part_ofPaHa02g08340.1-exon-2-1787993825:13162107..13162147mRNAPaHa02g08340.1
exon
part_ofPaHa02g08340.1-exon-2-1787993825:13162245..13162341mRNAPaHa02g08340.1
exon
part_ofPaHa02g08340.1-exon-2-1787993825:13170981..13171059mRNAPaHa02g08340.1
exon
part_ofPaHa02g08340.1-exon-2-1787993825:13171128..13171238mRNAPaHa02g08340.1
