Feature identity
- Identifier
- PaHa02g08170.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,052 bp
- Genomic location
- 2:12,905,750–12,917,009
- Strand
- +
Hass · mRNA
PaHa02g08170.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,052
- bp
- 2:12,905,750–12,917,009
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g08170
- eggNOG
- Preferred name: LOC123137013 | Seed ortholog: 337451.A0A443N205 | COG: COG1094 | eggNOG OG: KH_1@131567|B-2, KH_1@2759|AR-7, KH_1@35493|Li-13
- Gene Ontology
- GO:0003700 DNA-binding transcription factor activity; GO:0003723 RNA binding; GO:0005515 protein binding; GO:0005576 extracellular region; GO:0005634 nucleus; GO:0006355 regulation of DNA-templated transcription; GO:1900057 positive regulation of leaf senescence; GO:2000028 regulation of photoperiodism, flowering
- KEGG
- KO: K13210 | BRITE: 00001, 03019, 03041
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g08170.1-protein
derives_frommRNAPaHa02g08170.1
mRNAPaHa02g08170.1
part_ofgenePaHa02g08170
CDS
part_ofPaHa02g08170.1-CDS-2-1787993825:12905750..12906059mRNAPaHa02g08170.1
CDS
part_ofPaHa02g08170.1-CDS-2-1787993825:12906728..12906822mRNAPaHa02g08170.1
CDS
part_ofPaHa02g08170.1-CDS-2-1787993825:12906924..12907109mRNAPaHa02g08170.1
CDS
part_ofPaHa02g08170.1-CDS-2-1787993825:12907258..12907344mRNAPaHa02g08170.1
CDS
part_ofPaHa02g08170.1-CDS-2-1787993825:12907459..12907530mRNAPaHa02g08170.1
CDS
part_ofPaHa02g08170.1-CDS-2-1787993825:12908817..12908936mRNAPaHa02g08170.1
CDS
part_ofPaHa02g08170.1-CDS-2-1787993825:12915759..12916149mRNAPaHa02g08170.1
CDS
part_ofPaHa02g08170.1-CDS-2-1787993825:12916219..12917009mRNAPaHa02g08170.1
exon
part_ofPaHa02g08170.1-exon-2-1787993825:12905750..12906059mRNAPaHa02g08170.1
exon
part_ofPaHa02g08170.1-exon-2-1787993825:12906728..12906822mRNAPaHa02g08170.1
exon
part_ofPaHa02g08170.1-exon-2-1787993825:12906924..12907109mRNAPaHa02g08170.1
exon
part_ofPaHa02g08170.1-exon-2-1787993825:12907258..12907344mRNAPaHa02g08170.1
exon
part_ofPaHa02g08170.1-exon-2-1787993825:12907459..12907530mRNAPaHa02g08170.1
exon
part_ofPaHa02g08170.1-exon-2-1787993825:12908817..12908936mRNAPaHa02g08170.1
exon
part_ofPaHa02g08170.1-exon-2-1787993825:12915759..12916149mRNAPaHa02g08170.1
exon
part_ofPaHa02g08170.1-exon-2-1787993825:12916219..12917009mRNAPaHa02g08170.1
