Feature identity
- Identifier
- PaHa02g07330.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,740 bp
- Genomic location
- 2:11,650,541–11,676,932
- Strand
- −
Hass · mRNA
PaHa02g07330.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,740
- bp
- 2:11,650,541–11,676,932
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g07330
- eggNOG
- Preferred name: VTE1 | Seed ortholog: 337451.A0A443N1R7 | COG: S | eggNOG OG: Tocopherol_cycl@131567|A-1
- Gene Ontology
- GO:0005886 plasma membrane; GO:0006631 fatty acid metabolic process; GO:0006979 response to oxidative stress; GO:0009266 response to temperature stimulus; GO:0009507 chloroplast; GO:0009534 chloroplast thylakoid; GO:0009644 response to high light intensity; GO:0009651 response to salt stress; GO:0009706 chloroplast inner membrane; GO:0009915 phloem sucrose loading; GO:0009941 chloroplast envelope; GO:0009976 tocopherol cyclase activity; GO:0010189 vitamin E biosynthetic process; GO:0010287 plastoglobule; GO:0015994 chlorophyll metabolic process; GO:0016122 xanthophyll metabolic process; GO:0031347 regulation of defense response
- KEGG
- EC: ec:5.5.1.24 | KO: K09834 | Pathway: 00130, 01100, 01110, 01240 | Module: M00112 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g07330.1-protein
derives_frommRNAPaHa02g07330.1
mRNAPaHa02g07330.1
part_ofgenePaHa02g07330
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11650541..11650641mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11653838..11653947mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11657409..11657581mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11658840..11658989mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11659870..11659986mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11661678..11661785mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11662651..11662748mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11667250..11667321mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11667423..11667592mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11669593..11669669mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11673870..11673949mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11676310..11676554mRNAPaHa02g07330.1
CDS
part_ofPaHa02g07330.1-CDS-2-1787993825:11676694..11676932mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11650541..11650641mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11653838..11653947mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11657409..11657581mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11658840..11658989mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11659870..11659986mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11661678..11661785mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11662651..11662748mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11667250..11667321mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11667423..11667592mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11669593..11669669mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11673870..11673949mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11676310..11676554mRNAPaHa02g07330.1
exon
part_ofPaHa02g07330.1-exon-2-1787993825:11676694..11676932mRNAPaHa02g07330.1
