Feature identity
- Identifier
- PaHa02g07200.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 3,366 bp
- Genomic location
- 2:11,508,339–11,524,900
- Strand
- +
Hass · mRNA
PaHa02g07200.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 3,366
- bp
- 2:11,508,339–11,524,900
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g07200
- eggNOG
- Preferred name: MYB3R4 | Seed ortholog: 337451.A0A3S3PS18 | COG: S | eggNOG OG: Myb_DNA-binding@131567|AWj-28, Myb_DNA-binding@2759|AhA-29
- Gene Ontology
- GO:0000976 transcription cis-regulatory region binding; GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific; GO:0003677 DNA binding; GO:0003700 DNA-binding transcription factor activity; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005819 spindle; GO:0006355 regulation of DNA-templated transcription; GO:0008285 negative regulation of cell population proliferation; GO:0009524 phragmoplast; GO:0009620 response to fungus; GO:0009751 response to salicylic acid; GO:0032465 regulation of cytokinesis; GO:0032875 regulation of DNA endoreduplication; GO:0043565 sequence-specific DNA binding; GO:0045892 negative regulation of DNA-templated transcription; GO:0045893 positive regulation of DNA-templated transcription; GO:0050832 defense response to fungus; GO:0070176 DRM complex; GO:1901181 negative regulation of cellular response to caffeine
- KEGG
- KO: K09420 | Pathway: 04151, 04218 | BRITE: 00001, 03000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g07200.1-protein
derives_frommRNAPaHa02g07200.1
mRNAPaHa02g07200.1
part_ofgenePaHa02g07200
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11508339..11508439mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11508872..11508926mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11511142..11511199mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11512951..11513045mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11513153..11513256mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11516035..11516163mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11516531..11518526mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11518842..11519167mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11520868..11520985mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11521370..11521615mRNAPaHa02g07200.1
CDS
part_ofPaHa02g07200.1-CDS-2-1787993825:11524763..11524900mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11508339..11508439mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11508872..11508926mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11511142..11511199mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11512951..11513045mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11513153..11513256mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11516035..11516163mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11516531..11518526mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11518842..11519167mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11520868..11520985mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11521370..11521615mRNAPaHa02g07200.1
exon
part_ofPaHa02g07200.1-exon-2-1787993825:11524763..11524900mRNAPaHa02g07200.1
