Feature identity
- Identifier
- PaHa01g04680.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 4,659 bp
- Genomic location
- 1:5,956,366–5,972,453
- Strand
- +
Hass · mRNA
PaHa01g04680.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 4,659
- bp
- 1:5,956,366–5,972,453
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa01g04680
- eggNOG
- Preferred name: HUA2 | Seed ortholog: 337451.A0A443NJK9 | COG: S | eggNOG OG: CID@131567|A-1*, CID@2759|AE-6, CID@35493|Di-10, PWWP@131567|A-1*, PWWP@2759|hk-17, PWWP@3193|ANg-21
- Gene Ontology
- GO:0003674 molecular_function; GO:0003700 DNA-binding transcription factor activity; GO:0005634 nucleus; GO:0006397 mRNA processing; GO:0009506 plasmodesma; GO:0009910 negative regulation of flower development; GO:0043481 anthocyanin accumulation in tissues in response to UV light; GO:0048497 maintenance of floral organ identity; GO:0048510 regulation of timing of transition from vegetative to reproductive phase
- KEGG
- EC: ec:2.1.1.37 | KO: K13167, K13191, K15560, K16847, K17398 | Pathway: 00270, 01100, 04148 | Module: M00035 | BRITE: 00001, 01000, 03000, 03021, 03032, 03036, 03041, 04990
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa01g04680.1-protein
derives_frommRNAPaHa01g04680.1
mRNAPaHa01g04680.1
part_ofgenePaHa01g04680
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5956366..5956476mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5956860..5956936mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5960224..5962509mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5962789..5963314mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5965924..5966032mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5967349..5967461mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5967530..5967717mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5968640..5969273mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5969373..5969823mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5972174..5972269mRNAPaHa01g04680.1
CDS
part_ofPaHa01g04680.1-CDS-1-1787993825:5972386..5972453mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5956366..5956476mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5956860..5956936mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5960224..5962509mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5962789..5963314mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5965924..5966032mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5967349..5967461mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5967530..5967717mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5968640..5969273mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5969373..5969823mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5972174..5972269mRNAPaHa01g04680.1
exon
part_ofPaHa01g04680.1-exon-1-1787993825:5972386..5972453mRNAPaHa01g04680.1
