Feature identity
- Identifier
- PaHa02g06080.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,328 bp
- Genomic location
- 2:9,968,694–9,977,754
- Strand
- −
Hass · mRNA
PaHa02g06080.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,328
- bp
- 2:9,968,694–9,977,754
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g06080
- eggNOG
- Preferred name: LOC108991714 | Seed ortholog: 337451.A0A443N1H2 | COG: COG0731 | eggNOG OG: Flavodoxin_1@131567|Aw-10, Flavodoxin_1@2759|RS-17, Radical_SAM@131567|Jq-14, Wyosine_form@131567|A-1
- Gene Ontology
- GO:0003824 catalytic activity; GO:0005506 iron ion binding; GO:0005515 protein binding; GO:0005739 mitochondrion; GO:0009507 chloroplast; GO:0010608 post-transcriptional regulation of gene expression; GO:0016491 oxidoreductase activity; GO:0031591 wybutosine biosynthetic process; GO:0045333 cellular respiration; GO:1904047 S-adenosyl-L-methionine binding
- KEGG
- EC: ec:4.1.3.44 | KO: K15449 | BRITE: 00001, 01000, 03016
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g06080.1-protein
derives_frommRNAPaHa02g06080.1
mRNAPaHa02g06080.1
part_ofgenePaHa02g06080
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9968694..9969000mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9969441..9969506mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9970794..9970891mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9970977..9971187mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9971327..9971484mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9972821..9972907mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9973030..9973220mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9973567..9973742mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9974903..9975018mRNAPaHa02g06080.1
CDS
part_ofPaHa02g06080.1-CDS-2-1787993825:9976837..9977754mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9968694..9969000mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9969441..9969506mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9970794..9970891mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9970977..9971187mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9971327..9971484mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9972821..9972907mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9973030..9973220mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9973567..9973742mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9974903..9975018mRNAPaHa02g06080.1
exon
part_ofPaHa02g06080.1-exon-2-1787993825:9976837..9977754mRNAPaHa02g06080.1
