Feature identity
- Identifier
- PaHa02g04100.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,421 bp
- Genomic location
- 2:6,887,172–6,908,476
- Strand
- −
Hass · mRNA
PaHa02g04100.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,421
- bp
- 2:6,887,172–6,908,476
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g04100
- eggNOG
- Preferred name: LOC103705537 | Seed ortholog: 337451.A0A3S3PRN1 | COG: S | eggNOG OG: Beta-Casp@131567|J-4, CPSF100_C@2759|A-1, Lactamase_B_6@131567|F-3, RMMBL@131567|B-2, RMMBL@2759|BF-9
- Gene Ontology
- GO:0005515 protein binding; GO:0005634 nucleus; GO:0005737 cytoplasm; GO:0005847 mRNA cleavage and polyadenylation specificity factor complex; GO:0009506 plasmodesma; GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing
- KEGG
- KO: K14402 | Pathway: 03015 | BRITE: 00001, 03019
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g04100.1-protein
derives_frommRNAPaHa02g04100.1
mRNAPaHa02g04100.1
part_ofgenePaHa02g04100
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6887172..6887273mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6887356..6887430mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6889503..6889667mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6890698..6890742mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6890865..6890996mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6892981..6893079mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6894458..6894553mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6896889..6897103mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6897547..6897799mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6898397..6898504mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6898592..6898649mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6900512..6900663mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6901137..6901231mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6902366..6902481mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6903587..6903713mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6903834..6903930mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6905269..6905437mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6905521..6905656mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6906598..6906661mRNAPaHa02g04100.1
CDS
part_ofPaHa02g04100.1-CDS-2-1787993825:6908360..6908476mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6887172..6887273mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6887356..6887430mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6889503..6889667mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6890698..6890742mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6890865..6890996mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6892981..6893079mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6894458..6894553mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6896889..6897103mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6897547..6897799mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6898397..6898504mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6898592..6898649mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6900512..6900663mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6901137..6901231mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6902366..6902481mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6903587..6903713mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6903834..6903930mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6905269..6905437mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6905521..6905656mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6906598..6906661mRNAPaHa02g04100.1
exon
part_ofPaHa02g04100.1-exon-2-1787993825:6908360..6908476mRNAPaHa02g04100.1
