Feature identity
- Identifier
- PaHa02g02560.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 2,097 bp
- Genomic location
- 2:4,545,546–4,574,960
- Strand
- +
Hass · mRNA
PaHa02g02560.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 2,097
- bp
- 2:4,545,546–4,574,960
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g02560
- eggNOG
- Preferred name: B'ETA | Seed ortholog: 337451.A0A443N0M5 | COG: S | eggNOG OG: B56@131567|A-1*, B56@1437183|ah-28, B56@2759|C-2!, B56@33090|NF-22, B56@3398|SP-25, Peptidase_M3@131567|C-2!
- Gene Ontology
- GO:0000398 mRNA splicing, via spliceosome; GO:0005515 protein binding; GO:0005634 nucleus; GO:0005730 nucleolus; GO:0005737 cytoplasm; GO:0005777 peroxisome; GO:0005829 cytosol; GO:0032000 positive regulation of fatty acid beta-oxidation; GO:0034605 cellular response to heat; GO:1900458 negative regulation of brassinosteroid mediated signaling pathway
- KEGG
- EC: ec:3.4.24.15 | KO: K11584 | Pathway: 03015 | BRITE: 00001, 01009, 03019, 03036
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g02560.1-protein
derives_frommRNAPaHa02g02560.1
mRNAPaHa02g02560.1
part_ofgenePaHa02g02560
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4545546..4545675mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4546387..4546508mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4548004..4548167mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4550909..4550999mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4552223..4552402mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4553035..4553115mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4554541..4554621mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4557107..4557199mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4559810..4559890mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4559997..4560159mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4560326..4560443mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4560533..4560605mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4561386..4561493mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4567276..4567373mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4567456..4567501mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4567847..4567943mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4570931..4571004mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4571142..4571246mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4571338..4571418mRNAPaHa02g02560.1
CDS
part_ofPaHa02g02560.1-CDS-2-1787993825:4574850..4574960mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4545546..4545675mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4546387..4546508mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4548004..4548167mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4550909..4550999mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4552223..4552402mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4553035..4553115mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4554541..4554621mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4557107..4557199mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4559810..4559890mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4559997..4560159mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4560326..4560443mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4560533..4560605mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4561386..4561493mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4567276..4567373mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4567456..4567501mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4567847..4567943mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4570931..4571004mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4571142..4571246mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4571338..4571418mRNAPaHa02g02560.1
exon
part_ofPaHa02g02560.1-exon-2-1787993825:4574850..4574960mRNAPaHa02g02560.1
