Feature identity
- Identifier
- PaHa02g02250.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,692 bp
- Genomic location
- 2:3,931,747–3,940,684
- Strand
- +
Hass · mRNA
PaHa02g02250.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,692
- bp
- 2:3,931,747–3,940,684
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g02250
- eggNOG
- Preferred name: LOC103705686 | Seed ortholog: 337451.A0A3S3N3K3 | COG: S | eggNOG OG: AMP-binding_C@131567|Drk-31, AMP-binding_C@3193|TGo-46, AMP-binding_C@3398|rEK-56, AMP-binding_C@35493|Ock-43, AMP-binding|LZB25G@2759, AMP-binding|LZB25G@3398
- Gene Ontology
- GO:0004321 fatty-acyl-CoA synthase activity; GO:0005739 mitochondrion; GO:0005777 peroxisome; GO:0009695 jasmonic acid biosynthetic process; GO:0102391 decanoate-CoA ligase activity
- KEGG
- EC: ec:6.2.1.12 | KO: K01904 | Pathway: 00130, 00940, 01100, 01110 | Module: M00039, M00137 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g02250.1-protein
derives_frommRNAPaHa02g02250.1
mRNAPaHa02g02250.1
part_ofgenePaHa02g02250
CDS
part_ofPaHa02g02250.1-CDS-2-1787993825:3931747..3932805mRNAPaHa02g02250.1
CDS
part_ofPaHa02g02250.1-CDS-2-1787993825:3935776..3935965mRNAPaHa02g02250.1
CDS
part_ofPaHa02g02250.1-CDS-2-1787993825:3937935..3938080mRNAPaHa02g02250.1
CDS
part_ofPaHa02g02250.1-CDS-2-1787993825:3938160..3938227mRNAPaHa02g02250.1
CDS
part_ofPaHa02g02250.1-CDS-2-1787993825:3940047..3940149mRNAPaHa02g02250.1
CDS
part_ofPaHa02g02250.1-CDS-2-1787993825:3940559..3940684mRNAPaHa02g02250.1
exon
part_ofPaHa02g02250.1-exon-2-1787993825:3931747..3932805mRNAPaHa02g02250.1
exon
part_ofPaHa02g02250.1-exon-2-1787993825:3935776..3935965mRNAPaHa02g02250.1
exon
part_ofPaHa02g02250.1-exon-2-1787993825:3937935..3938080mRNAPaHa02g02250.1
exon
part_ofPaHa02g02250.1-exon-2-1787993825:3938160..3938227mRNAPaHa02g02250.1
exon
part_ofPaHa02g02250.1-exon-2-1787993825:3940047..3940149mRNAPaHa02g02250.1
exon
part_ofPaHa02g02250.1-exon-2-1787993825:3940559..3940684mRNAPaHa02g02250.1
