Feature identity
- Identifier
- PaHa02g02190.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 702 bp
- Genomic location
- 2:3,866,750–3,875,933
- Strand
- +
Hass · mRNA
PaHa02g02190.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 702
- bp
- 2:3,866,750–3,875,933
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa02g02190
- eggNOG
- Preferred name: FKBP16-3 | Seed ortholog: 337451.A0A3S3M8U5 | COG: COG0545 | eggNOG OG: FKBP_C@131567|JD-12
- Gene Ontology
- GO:0003755 peptidyl-prolyl cis-trans isomerase activity; GO:0005515 protein binding; GO:0005829 cytosol; GO:0008150 biological_process; GO:0009507 chloroplast; GO:0009534 chloroplast thylakoid; GO:0009543 chloroplast thylakoid lumen; GO:0009570 chloroplast stroma; GO:0009579 thylakoid; GO:0010207 photosystem II assembly; GO:0016491 oxidoreductase activity; GO:0031977 thylakoid lumen
- KEGG
- EC: ec:5.2.1.8 | KO: K01802 | BRITE: 00001, 01000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa02g02190.1-protein
derives_frommRNAPaHa02g02190.1
mRNAPaHa02g02190.1
part_ofgenePaHa02g02190
CDS
part_ofPaHa02g02190.1-CDS-2-1787993825:3866750..3866789mRNAPaHa02g02190.1
CDS
part_ofPaHa02g02190.1-CDS-2-1787993825:3868569..3868852mRNAPaHa02g02190.1
CDS
part_ofPaHa02g02190.1-CDS-2-1787993825:3870684..3870767mRNAPaHa02g02190.1
CDS
part_ofPaHa02g02190.1-CDS-2-1787993825:3871800..3871849mRNAPaHa02g02190.1
CDS
part_ofPaHa02g02190.1-CDS-2-1787993825:3872011..3872059mRNAPaHa02g02190.1
CDS
part_ofPaHa02g02190.1-CDS-2-1787993825:3875364..3875438mRNAPaHa02g02190.1
CDS
part_ofPaHa02g02190.1-CDS-2-1787993825:3875814..3875933mRNAPaHa02g02190.1
exon
part_ofPaHa02g02190.1-exon-2-1787993825:3866750..3866789mRNAPaHa02g02190.1
exon
part_ofPaHa02g02190.1-exon-2-1787993825:3868569..3868852mRNAPaHa02g02190.1
exon
part_ofPaHa02g02190.1-exon-2-1787993825:3870684..3870767mRNAPaHa02g02190.1
exon
part_ofPaHa02g02190.1-exon-2-1787993825:3871800..3871849mRNAPaHa02g02190.1
exon
part_ofPaHa02g02190.1-exon-2-1787993825:3872011..3872059mRNAPaHa02g02190.1
exon
part_ofPaHa02g02190.1-exon-2-1787993825:3875364..3875438mRNAPaHa02g02190.1
exon
part_ofPaHa02g02190.1-exon-2-1787993825:3875814..3875933mRNAPaHa02g02190.1
