Feature identity
- Identifier
- PaHa_c451g00020.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,308 bp
- Genomic location
- unplaced_contig_451:17,173–22,140
- Strand
- −
Hass · mRNA
PaHa_c451g00020.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,308
- bp
- unplaced_contig_451:17,173–22,140
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c451g00020
- eggNOG
- Preferred name: LOC103696927 | Seed ortholog: 337451.A0A3S3PVH1 | eggNOG OG: AMP-binding|88PUXQ@2759
- Gene Ontology
- GO:0004467 long-chain fatty acid-CoA ligase activity; GO:0005783 endoplasmic reticulum; GO:0006631 fatty acid metabolic process; GO:0006633 fatty acid biosynthetic process; GO:0009506 plasmodesma; GO:0009507 chloroplast; GO:0010143 cutin biosynthetic process; GO:0010311 lateral root formation; GO:0031957 very long-chain fatty acid-CoA ligase activity; GO:0050832 defense response to fungus
- KEGG
- EC: ec:6.2.1.3 | KO: K01897 | Pathway: 00061, 00071, 01100, 01212, 04146 | Module: M00086 | BRITE: 00001, 01000, 01004, 04147
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c451g00020.1-protein
derives_fromgenePaHa_c451g00020
CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:17173..17220CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:17905..18024CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:18373..18555CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:19071..19210CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:19893..20138CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:20877..20994CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:21083..21158CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:21271..21337CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:21450..21537CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:21643..21753CDS
part_ofPaHa_c451g00020.1-CDS-unplaced_contig_451-1787993825:22030..22140exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:17173..17220exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:17905..18024exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:18373..18555exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:19071..19210exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:19893..20138exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:20877..20994exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:21083..21158exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:21271..21337exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:21450..21537exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:21643..21753exon
part_ofPaHa_c451g00020.1-exon-unplaced_contig_451-1787993825:22030..22140