Feature identity
- Identifier
- PaHa_c410g00040.1
- Feature type
- mRNA
- Genome collection
- Hass
- Organism
- Persea americana-Hass
- Sequence length
- 1,023 bp
- Genomic location
- unplaced_contig_410:6,353–7,662
- Strand
- −
Hass · mRNA
PaHa_c410g00040.1
A connected PerseaDB feature record linking structure, functional evidence, sequences, and downstream analysis tools.
- 1,023
- bp
- unplaced_contig_410:6,353–7,662
- genomic location
Functional evidence
These terms are computationally inferred by eggNOG-mapper and should not be interpreted as experimental validation in avocado.
Functional index matched identifier: PaHa_c410g00040
- eggNOG
- Preferred name: PEX11 | Seed ortholog: 913774.A0A0C3DH87 | COG: S | eggNOG OG: PEX11@131567|Z-5, PEX11@2759|AL-7
- Gene Ontology
- GO:0003674 molecular_function; GO:0005515 protein binding; GO:0005778 peroxisomal membrane; GO:0005783 endoplasmic reticulum; GO:0006631 fatty acid metabolic process; GO:0016559 peroxisome fission; GO:0019395 fatty acid oxidation; GO:0042802 identical protein binding; GO:0042803 protein homodimerization activity
- KEGG
- KO: K13352 | Pathway: 04146 | BRITE: 00001, 02000
Biological context
Connected feature records
Follow parent–child relationships among genes, transcripts, coding regions, and protein products.
polypeptidePaHa_c410g00040.1-protein
derives_fromgenePaHa_c410g00040
CDS
part_ofPaHa_c410g00040.1-CDS-unplaced_contig_410-1787993825:6353..6688CDS
part_ofPaHa_c410g00040.1-CDS-unplaced_contig_410-1787993825:6846..7293CDS
part_ofPaHa_c410g00040.1-CDS-unplaced_contig_410-1787993825:7424..7662exon
part_ofPaHa_c410g00040.1-exon-unplaced_contig_410-1787993825:6353..6688exon
part_ofPaHa_c410g00040.1-exon-unplaced_contig_410-1787993825:6846..7293exon
part_ofPaHa_c410g00040.1-exon-unplaced_contig_410-1787993825:7424..7662